removed legacy threads param

tiagofilipe12 · Jul 3, 2018 · c69f3b2 · c69f3b2
1 parent 400966b
commit c69f3b2
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diff --git a/README.md b/README.md
@@ -67,7 +67,6 @@ Usage: nextflow run tiagofilipe12/pATLASflow [options] or nextflow run main.nf [
    Main options:
        --help  Opens this help. It will open only when --help is provided. So, yes, this line is pretty useless since you already know that if you reached here.
        --version   Prints the version of the pipeline script.
-       --threads   Number of threads that the pipeline will have to run.    Default: 1
        --mash_screen   Enables mash screen run.
        --assembly  Enables mash dist run to use fasta file against plasmid db
        --mapping   Enables mapping pipeline.

diff --git a/lib/Helper.groovy b/lib/Helper.groovy
@@ -18,8 +18,6 @@ class Help{
             "provided. So, yes, this line is pretty useless since you already " +
             "know that if you reached here.")
         println("       --version   Prints the version of the pipeline script.")
-        println("       --threads   Number of threads that the pipeline will have to" +
-            " run.    Default: 1")
         println("       --mash_screen   Enables mash screen run.")
         println("       --assembly  Enables mash dist run to use fasta file against " +
             "plasmid db")