Add doc for PR github#1401

Signed-off-by: Tim Vaillancourt <tim@timvaillancourt.com>

doc/command-line-flags.md

@@ -202,6 +202,10 @@ List of metrics and threshold values; topping the threshold of any will cause th
 
 Typically `gh-ost` is used to migrate tables on a master. If you wish to only perform the migration in full on a replica, connect `gh-ost` to said replica and pass `--migrate-on-replica`. `gh-ost` will briefly connect to the master but otherwise will make no changes on the master. Migration will be fully executed on the replica, while making sure to maintain a small replication lag.
 
+### mysql-wait-timeout
+
+If set to a value greater than zero, causes `gh-ost` to set a provided [MySQL `wait_timeout`](https://dev.mysql.com/doc/refman/8.0/en/server-system-variables.html#sysvar_wait_timeout) for MySQL sessions opened by `gh-ost`, specified in seconds.
+
 ### postpone-cut-over-flag-file
 
 Indicate a file name, such that the final [cut-over](cut-over.md) step does not take place as long as the file exists.