Skip to content

timyerg/venny4py

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

2 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Venny4Py

Simple Venn diagrams for Python 3, up to 4 sets (for more than 4 sets it is better to use UpSet plot). It will take as input a dictionary of 2-4 sets and produce a venn diagram and a txt file with element intersections.

Dependencies:

  • itertools
  • matplotlib

Installation:

pip install venny4py

When installed, import:

from venny4py.venny4py import *

#dict of sets
sets = {
    'Set1': set(list("Harry Potter")),
    'Set2': set(list("Hermione Granger")),
    'Set3': set(list("Ron Weasley")),
    'Set4': set(list("Severus Snape"))
}
    
venny4py(sets=sets)

Parameters:

  • sets - disctionary of sets (required)
  • out - directory to output files, default current directory
  • asax - if diagram should be plotted as subplot, then provide matplotlib ax here. Default is 'False' which will plot new figure
  • ext - image extension, default is 'png'.
  • dpi - image resolution, default is 300 dpi.
  • size - image size in inches, default is 3.5. If using custom ax through "asax" parameter, specify approximate size of subplot in inches since fontsize is dependent on this parameter.
  • colors - set of colors for each set, default is "bgrc".
  • line_width - control line width.
  • font_size - control font size.
  • legend_cols - number of legend columns, default is 2.
  • column_spacing - column spacing in legend, default is 4.
  • edge_color - edge colors, default is 'black'.

Check "Examples.ipynb" https://github.com/timyerg/venny4py/blob/main/Examples.ipynb to see some examples.