test: add nd2 test #188
Merged
test: add nd2 test #188
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Codecov Report
@@ Coverage Diff @@
## v2 #188 +/- ##
=======================================
Coverage 25.91% 25.91%
=======================================
Files 25 25
Lines 795 795
=======================================
Hits 206 206
Misses 589 589 📣 We’re building smart automated test selection to slash your CI/CD build times. Learn more |
tlambert03
added a commit
that referenced
this pull request
Jul 6, 2023
* Squashed commit of the following: commit 271df84 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 12:18:40 2023 -0400 remove import warnings, more test coverage commit df1cfde Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 11:13:39 2023 -0400 drop 37 commit 10e213b Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 11:11:16 2023 -0400 fix wheel and sdist commit ea5e35d Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 11:07:26 2023 -0400 no relative imports commit d27488d Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 11:06:22 2023 -0400 use _autogenerated folder instead commit 634c0f3 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 10:53:15 2023 -0400 update paquo test commit 5f28b98 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 10:14:47 2023 -0400 fix typing commit 0d5d1e6 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 10:12:33 2023 -0400 tests working now? commit 557ae05 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 08:47:16 2023 -0400 fix py38 commit 590b888 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sun Jul 2 08:05:37 2023 -0400 add paquo test commit 366daea Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 16:24:06 2023 -0400 mid work on paquo tests... (still broken) commit 995a203 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 14:15:35 2023 -0400 catch deprecated imports commit f2f53db Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 14:15:25 2023 -0400 better roi unions commit 8eba2c7 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 11:11:24 2023 -0400 add back validate_xml commit d1b4b52 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 10:00:32 2023 -0400 update aicsimageio test commit 01761f2 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:51:20 2023 -0400 fix fixture name commit cbdebf0 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:49:24 2023 -0400 update test commit 25d1505 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:38:05 2023 -0400 comment commit 9fb0ac5 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:37:34 2023 -0400 remove comment commit ba9df67 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:36:53 2023 -0400 pyproject format commit 9482226 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:32:47 2023 -0400 remove aics data for now commit 1b7e425 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:31:43 2023 -0400 update workflows commit 4cd3a23 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:22:08 2023 -0400 avoid ome_types import during build commit e44f7d8 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:17:53 2023 -0400 fix buildpytest commit 37ad16c Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:11:20 2023 -0400 add concurrency limits commit f9cb4e9 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 09:09:50 2023 -0400 fix enum names commit c3f669d Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 07:28:05 2023 -0400 fix weakref type commit f74de81 Author: Talley Lambert <talley.lambert@gmail.com> Date: Sat Jul 1 07:01:25 2023 -0400 typing again commit 7403cad Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 21:24:15 2023 -0400 more type fixes commit 30cd47d Author: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Date: Fri Jun 30 22:09:14 2023 +0000 style(pre-commit.ci): auto fixes [...] commit a2c386a Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 18:08:58 2023 -0400 Update _reference.py commit c9b7f8b Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 17:23:14 2023 -0400 fix type commit 3d378a2 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 17:20:55 2023 -0400 move aicsimageio test commit be6cfda Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 17:19:54 2023 -0400 fix type commit 9cfb2a7 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 17:17:20 2023 -0400 add dev deps to test commit 58e06f9 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 17:15:58 2023 -0400 update main print commit 610f6e3 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 16:52:55 2023 -0400 remove typealias commit 7f1d315 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 16:51:51 2023 -0400 remove char commit 522d389 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 16:47:24 2023 -0400 add back autogen test commit 4d1b13e Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 16:17:02 2023 -0400 remove unicode commit bb871e4 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 16:15:39 2023 -0400 add future imports commit d509338 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 16:12:27 2023 -0400 change build requirements commit 0d002a1 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 16:09:55 2023 -0400 add back roundtrip commit 72eaabe Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 16:07:59 2023 -0400 working tests! commit 68b4351 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 12:47:35 2023 -0400 working on aics commit 30eea00 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 10:59:41 2023 -0400 fix some tests, add more data commit db76f52 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 09:41:40 2023 -0400 add dep commit 2742b5c Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 09:27:40 2023 -0400 remove tiled reader commit 04b1a6a Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 09:23:16 2023 -0400 add names to simpletypes commit c002ee6 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 09:12:39 2023 -0400 fix pre-commit commit fa4548c Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 09:09:20 2023 -0400 fix check manifest commit 13f9c55 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 09:06:45 2023 -0400 remove unused script commit af494fa Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 09:06:08 2023 -0400 fix aics test commit a6b35be Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 08:58:04 2023 -0400 update aics script commit 3b90236 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 08:50:57 2023 -0400 test aicsimage on pr commit 03d6cdf Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 08:49:31 2023 -0400 list packages in aics test commit 457e9be Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 08:41:45 2023 -0400 move tests back commit 9f37c02 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 08:30:06 2023 -0400 adding deprecated names commit a5940d1 Author: Talley Lambert <talley.lambert@gmail.com> Date: Fri Jun 30 06:43:26 2023 -0400 misc commit da4c173 Author: Talley Lambert <talley.lambert@gmail.com> Date: Thu Jun 29 16:55:20 2023 -0400 wip commit 7e042c7 Author: Talley Lambert <talley.lambert@gmail.com> Date: Thu Jun 29 16:45:55 2023 -0400 fixed various tests commit b7b857c Author: Talley Lambert <talley.lambert@gmail.com> Date: Thu Jun 29 08:35:59 2023 -0400 wip on validation commit af3ec09 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 15:42:57 2023 -0400 add deps commit 61f52d3 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 15:41:03 2023 -0400 misc commit 3f98d8c Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 15:25:00 2023 -0400 update deps changetest commit 3e455a4 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 15:24:52 2023 -0400 update test, change deps commit e51a1a0 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 15:22:21 2023 -0400 more deps update commit ca6a00d Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 14:46:32 2023 -0400 more cleanup remove tox, update pyproject commit 430fce7 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 11:29:55 2023 -0400 working on tests commit df72bd9 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 10:40:52 2023 -0400 remove ome_types v1 commit 1a35d39 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 10:38:10 2023 -0400 move units commit f5ee006 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 10:36:54 2023 -0400 fix kwargs commit 12a4416 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 09:59:10 2023 -0400 fix tests commit f6c9752 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 28 09:56:42 2023 -0400 add serialization commit acbe2e5 Author: Talley Lambert <talley.lambert@gmail.com> Date: Tue Jun 27 17:11:34 2023 -0400 working tests! commit 4f16b0d Author: Talley Lambert <talley.lambert@gmail.com> Date: Tue Jun 27 14:04:39 2023 -0400 config and main changes commit 9c7a6b1 Author: Talley Lambert <talley.lambert@gmail.com> Date: Tue Jun 27 09:35:43 2023 -0400 buncha changes commit d79a438 Author: Talley Lambert <talley.lambert@gmail.com> Date: Mon Jun 26 17:59:33 2023 -0400 wip2 commit eda6b22 Author: Talley Lambert <talley.lambert@gmail.com> Date: Thu Jun 22 20:35:30 2023 -0400 wip on xsdata commit a674cd9 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 21 17:43:15 2023 -0400 working on tests commit 337340b Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 21 14:53:36 2023 -0400 making ome_types2 commit 74380d3 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 21 14:53:19 2023 -0400 move tests commit 2e733f0 Author: Talley Lambert <talley.lambert@gmail.com> Date: Wed Jun 21 10:55:11 2023 -0400 undo change commit 2b7784b Author: Talley Lambert <talley.lambert@gmail.com> Date: Tue Jun 20 19:17:26 2023 -0400 ruff example commit 8a7ac3c Author: Talley Lambert <talley.lambert@gmail.com> Date: Tue Jun 20 18:07:23 2023 -0400 wip commit 8909afc Author: Talley Lambert <talley.lambert@gmail.com> Date: Tue Jun 20 17:39:52 2023 -0400 misc commit 05856b9 Author: Talley Lambert <talley.lambert@gmail.com> Date: Tue Jun 20 16:24:31 2023 -0400 use old autogen name commit 8f3373c Author: Talley Lambert <talley.lambert@gmail.com> Date: Tue Jun 20 11:52:20 2023 -0400 rename old autogen * checkin xsdata-pydantic * style(pre-commit.ci): auto fixes [...] * test: add more tests (#177) * test: adding tests * remove branch restriction on pr tests * fix color * fix aicsimageio test * working on canonicalization and exclude_unset * minimize roundtrip test code * add report * add more tests * add more tests * fix py38 types * fix: more robust id conversion (#180) * more robust ids * add uuid factory, commented out * fix: clear converted ids at the beginning of each OME instance * update precommit * add test file * fix version * test: add typing tests (#178) * test: adding typesafety * fix manifest * add test dep * test on push to v2 * don't warn unused * feat: better rich_repr (#181) * fix: fix rich repr * bring back plain repr for non rich * fix: fix metadata only (#184) * fix: fix metadata only * fix pre-commit * fix: use date time instead of xsdata XMLDateTime (#182) * fix: use datetime instead of XMLDateTime * add more test * fix: better sequence for structured annotations (#186) * fix: better sequence for structured annotations * fix iter * test: Omero-cli-transfer test (#187) * wip * fix: better sequence for structured annotations * fix iter * test: add omero-cli-test * fix skip * test: add nd2 test (#188) * test: add nd2 test * fix command * build: add back py37 support (#189) * fix: Fix colors (#190) * fix: fix colors * test * fix mypy --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
adds a test against nd2, which recently added ome_metadata output