v1.1.3

Updated for compilation issues with newer gcc and added check for duplicate variant sets

v1.1.2

Bug fixes in auxiliary scripts, account for read list when already paired in read classification, and other fixes.

v1.1.1

Changed the per read probabilities to float, to save space, as there shouldn't been that many alignments for one read to make a difference. Also used smaller int types in the read struct. This should be a large space saver for read classification when considering hundreds of millions of reads.

v1.1.0

Fixed inefficient use of khash and lowered the starting capacity of some vectors to reduce memory usage.

v1.0.0

Merge branch 'master' of https://github.com/tony-kuo/eagle