[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
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Updated
Aug 26, 2023 - Julia
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
Biological sequences for the julia language
A Julia package to read, write and manipulate macromolecular structures
Parse and process FASTA and FASTQ formatted files of biological sequences.
Sequence alignment tools
Nucleic and amino acid primitive types
Parse and process SAM and BAM formatted files
K-mer counting algorithms and count-data utilities for the BioJulia framework
Datastores for reads, not your papa's FASTQ files.
The BioJulia package registry
Biological sequence variation
A small Julia package to represent BioSequences as a Voss matrix
collection of miscellaneous command line bioinformatic scripts written in julia for speed
Fast Inference of Biological Networks from Directed Regulations (Findr) in Julia
Count organic atoms in a BioSequence
Representing BioSequences as Simplex numerical matrix
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