Image analysis approaches to analyze the OAI magnetic resonance images

Knee MRI cartilage segmentation model used in 2019 IWOAI segmentation challenge

Implementation of a new hybrid machine learning technique for multi-fidelity surrogates of finite elements models with applications in multi-physics modeling of soft tissues.

Matlab code for calculating and displaying MRI T1rho images

The game consists of a spaceship and some rows of aliens. The spaceship moves left to right based on user input and can fire bullets at the aliens. The aliens move in a fixed pattern and fire bullets at the spaceship randomly. The game ends when the spaceship has been hit 3 times (game over) or the aliens have all been hit (beating the game).

Cartilage analysis for Toluidine blue slides

This Python script visualises the T2 index's development over time post-surgery using a grouped bar chart. It compares cartilage zones ("deep," "global," "superficial") with data from Trattnig et al. (2015). The T2 index assesses cartilage repair quality, with 95% CI error bars and observation counts shown on bars.

Growth Hormone effect on Cartilage Growth Plate; Light-Sheet Microscopy; Pseudocoloring | Projects I started and still working on in Andrei Chagin Lab | Karolinska Institutet