An ImageJ plugin to quantify ciliary shape, length, and fluorescence.

ImageJ plugin to preform image binarization based on a canny edge detection in 3 dimensions

Plugin allowing for manual definition of Areas of Interest in a Stack in order pre-process images for CiliaQ

An ImageJ plugin to prepare images for analysis using CiliaQ.

An ImageJ plugin to edit segmented channels in images output by CiliaQ_Preparator.

Template for an R markdown script to bundle and analyze the output from CiliaQ