Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

Python implementation of the paper "Discrete Differential-Geometry Operators for Triangulated 2-Manifolds" by Meyer et. al. VisMath 2002

This repository contains the python implementation of the paper titled "Discrete Differential-Geometry Operators for Triangulated 2-Manifolds" by Meyer et. al. VisMath 2002 http://multires.caltech.edu/pubs/diffGeoOps.pdf

Matlab and Python code to compute perturbed topological signatures (PTS), an efficient topological representation that lies on the Grassmann manifold.

Riemannian geometry in JAX

ArchGeo library code for the paper "Discrete Orthogonal Structures"

Code-repository for the ICML 2020 paper Fairwashing explanations with off-manifold detergent

Pose refinement with differentiable rendering

A package for protein conformational ensemble analyses based on a differential geometry representation of protein backbones.

A Python package for information-geometric and information-topological analysis of mathematical models

Calculates the eigendecomposition of the Laplace-Beltrami operator on charts of Riemannian manifolds. Moved to https://git.sr.ht/~jmbr/laplace-beltrami-eigensolver

Graph dynamical systems library

Building geometric objects using blending techniques and global deformations

String theory geometry toolkit

A toolkit to manipulate n-dimensional geometric curves in Python ➰

Drafts of textbooks. One on the math inspired by supersymmetric field theories. One on low dimensional (below 3+1) integrable physics.

Integrators on homogeneous spaces

Simple visualization of oblique cone intersection with unit sphere

Laplacian of functions defined on submanifolds in Euclidean space and, even more generally, on Riemannian and pseudo-Riemannian manifolds.

A symbolic differential form library for python