FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phosphoproteomic and metabolomic datasets.
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Jan 20, 2022 - R
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dorothea
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Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal reasoning, plus pathway enrichment to put results into biological context. GUI-based (minimal coding experience required).
bioinformatics pidgin drug-discovery chemoinformatics shiny-apps progeny moa carnival dorothea mechanism-of-action
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Feb 11, 2023 - R
Dorothea is a drug dataset. Chemical compounds represented by structural molecular features must be classified as active (binding to thrombin) or inactive. The dataset contained 100000 features(columns) and 800 observations(samples) in training dataset and 100000 features and 350 observations in validation dataset.
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Sep 24, 2017 - R
this repository includes scRNA_seq analysis scripts of the data presented in https://www.sciencedirect.com/science/article/pii/S2473952923005608
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Dec 25, 2024
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