Molecular dynamics simulation software

A lightweight ab initio molecular dynamics simulation program

A performance-oriented prototyping harness for state of the art Molecular Dynamics algorithms

A Python library for ab-initio molecular dynamics simulations

MD simulation for a coarse grained DNA model, parallelized by OpenMP

Response of copper nanowire under tensile loading (Using C++ LAMMPS package)

GPUDirect Async implementation of CoMD-CUDA

Deductive Multiscale Simulator

Code for numerical experiments using Langevin Dynamics with constraints

tiny molecular dynamics (Trabajo final de Computación Paralela, curso de posgrado de FaMAF)

course project for HPPC

Molecular Dynamics Framework

Molecular dynamics program developed for my undergraduate thesis.

tiny molecular dynamics simulator

Code to model active loop extrusion on chromatin using hybrid MD-MC.

Velocity Auto Correlation Function

Python package for commonly used molecular simulation functions.

Tutorials from OpenMM.

Mathematical modeling and simulations. Mainly molecular dynamics and Monte Carlo Simulations.

Quasi-hard-spheres of different sizes in a box