Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch sampling and storing using OpenSlide. Patches may be stored in LMDB, HDF5 files, or to disk. It is highly recommended to fork and download this repository so that personal customisations can be made for your work.
An ITK ImageIO module for the OpenSlide library.
Code for gleason grading a whole slide in 1 minute or less
Whole Slide Image Segmentation
A Python package for the processing of whole slide histopathological images
GUI to Classify Pathology Slides for Neural Net Training
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