An open database of polygenic scores and relevant metadata needed to apply and evaluate them correctly.
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Updated
Nov 7, 2024 - Python
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polygenic-scores
Here are 14 public repositories matching this topic...
Python applications and libraries for working with PGS data and the PGS Catalog
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Nov 6, 2024 - Python
The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation
workflow
nextflow
polygenic-risk-scores
prs
pgs
genetic-risk-score
polygenic-scores
pgs-catalog
polygenic-score
polygenic-risk-score
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Nov 19, 2024 - Nextflow
multiPGS_py is a fast, simple and low-memory python method to calculate polygenic scores (PGS/PRS)
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Oct 24, 2024 - Python
R package for the analysis of massive SNP arrays.
bioinformatics
r
big-data
parallel-computing
statistical-methods
r-package
memory-mapped-file
snp-data
polygenic-scores
population-structure-inference
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Sep 24, 2024 - R
A toolkit to calculate polygenic scores using PLINK2, PRS-CS, RapidoPGS, or PRSice2.
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Updated
Aug 16, 2024 - Shell
(superseded by pygscatalog) Utilities for working with PGS Catalog API and scoring files
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Updated
Jun 25, 2024 - Python
quincunx: an R package to query, download and wrangle PGS Catalog data
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Updated
Jul 4, 2023 - R
Software program for generating synthetic datasets for genotypes and phenotypes
bioinformatics
genomics
genetics
simulation
julia
generative-model
polygenic-risk-scores
phenotyping
data-generator
phenotypes
synthetic-data
polygenic-scores
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Updated
Jun 1, 2023 - Jupyter Notebook
quincunx: an R package to query, download and wrangle PGS Catalog data
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Updated
Aug 14, 2022 - R
Multi Kernel Linear Mixed Models for Complex Phenotype Prediction
machine-learning
gwas
polygenic-risk-scores
kernel-methods
gaussian-processes
statistical-genetics
gaussian-process-regression
polygenic-scores
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Updated
Jul 6, 2022 - Python
Polygenic Risk Scores (PRS) pipeline.
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Updated
Jul 5, 2022 - R
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