promoter-sequence-architectures

Here are 4 public repositories matching this topic...

snikumbh / seqArchR

seqArchR: Identifying (promoter) sequence architectures de novo using NMF

r clustering scikit-learn r-package nmf unsupervised-machine-learning sequence-analysis nonnegative-matrix-factorization sequence-architectures promoter-sequence-architectures

Updated Mar 6, 2024
R

camilababo / Application-of-ML-approaches-towards-the-prediction-of-gene-expression-levels-in-S.thermophilus

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The main goal of this project is to construct a workflow for the prediction of gene expression levels in Stretococcus thermophilus from promoter sequences.

machine-learning bioinformatics promoter-sequence-architectures gene-expression-prediction

Updated Jun 30, 2022
Jupyter Notebook

snikumbh / archR

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archR: Identifying promoter sequence architectures de novo using NMF

r scikit-learn discovery r-package nmf unsupervised-machine-learning non-negative-matrix-factorization sequence-architectures promoter-sequence-architectures archr

Updated Jul 1, 2021
R

adamyhe / elemeNT_core_promoter_pwms

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More accessible dump of the PWMs from ElemeNT (10.1080/21541264.2015.1067286)

promoter promoter-sequence-architectures sequence-motifs core-promoter-elements core-promoter-motifs transcriptional-regulation

Updated Feb 16, 2024
Python

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promoter-sequence-architectures

Here are 4 public repositories matching this topic...

snikumbh / seqArchR

camilababo / Application-of-ML-approaches-towards-the-prediction-of-gene-expression-levels-in-S.thermophilus

snikumbh / archR

adamyhe / elemeNT_core_promoter_pwms

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