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protein-fitness-prediction

Here are 5 public repositories matching this topic...

J-SNACKKB / FLIP

A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design

protein protein-sequences representation-learning protein-design protein-function-prediction protein-fitness-prediction

Updated Sep 30, 2024
Jupyter Notebook

lucidrains / tranception-pytorch

Implementation of Tranception, an attention network, paired with retrieval, that is SOTA for protein fitness prediction

deep-learning retrieval transformers artificial-intelligence attention-mechanism protein-fitness-prediction

Updated Jun 19, 2022
Python

PyPEF

Protein-Engineering-Framework / PyPEF

PyPEF – Pythonic Protein Engineering Framework

machine-learning regression python3 protein-sequences protein-engineering in-silico protein-fitness-prediction

Updated Dec 13, 2024
Python

microsoft / protein-uq

Benchmarking uncertainty quantification methods on proteins.

protein protein-sequences uncertainty-neural-networks uncertainty-quantification uncertainty-estimation active-learning protein-design protein-function-prediction protein-fitness-prediction

Updated Aug 4, 2023
Shell

PyPEF

niklases / PyPEF

PyPEF – Pythonic Protein Engineering Framework

machine-learning regression python3 protein-sequences protein-engineering in-silico protein-fitness-prediction

Updated Dec 13, 2024
Python

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