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scrnaseq-data

Here are 4 public repositories matching this topic...

Dragonmasterx87 / Interactive-3D-Plotting-in-Seurat-3.0.0

This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data

plotting rna-seq-analysis umap scrnaseq seurat 3dtsne 3dpca 3dumap scrnaseq-data seurat-objects

Updated Feb 23, 2023
R

jaleesr / BITFAM

BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequencing data. Please see Gao S et al., Genome Research (2021) https://genome.cshlp.org/content/31/7/1296 for details.

transcription-factors rna-seq r scrna-seq bayesian-inference single-cell scrna-seq-analysis scrnaseq-data

Updated Feb 13, 2023
R

RuzhangZhao / savis

Adaptive Visualization for Single-cell RNA-seq

dimensionality-reduction genomics-visualization visualization-tools scrnaseq-data singlecellgenomics low-dimensional-embedding

Updated Jun 2, 2023
R

scRNASeq

OlivierRaineteauSBRI / scRNASeq

Repo linked to our recent publication in Science Advances

scrna-seq spatial-analysis spatial-data transcriptomics brain spatial-data-analysis scrna-seq-data seurat scrna-seq-analysis spatial-transcriptomics visium scrna-pipeline scrnaseq-data scrnaseq-datasets seurat-objects biology-project

Updated Jan 31, 2024
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