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snv

Here are 3 public repositories matching this topic...

acorn

TNTurnerLab / acorn

acorn is an R package that examines various features of de novo variants including subsetting DNVs by individual, variant type, or genomic region; calculating features including variant change counts, lengths, and presence/absence at CpG sites; and characteristics of parental age and number of DNVs.

r genomics genome variants snv denovo indel mnv

Updated May 18, 2023
R

nriddiford / mutationProfiles

Extract and explore snv data

snv plot-mutations mutational-signatures plot-mutect plot-varscan filter-mutect filter-varscan

Updated Nov 4, 2021
R

Mahsa-Ehsanifard / maftools

maftools for SNV mutation analysis, summarizes, and visualization

mutation snv maftools

Updated Aug 14, 2024
R

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