A GUI to simplify and streamline the plotting and analysis of medical physics simulations

TOPAS application for simulating clustered DNA damage

This is a TOPAS-based Monte Carlo package to help enable the simulation of pencil beam scanning proton therapy beamlines and collimation devices.

TOPAS model of the Clatterbridge Cancer Centre, UK 60 MeV Ocular Proton Therapy Beamline

Optimisation for topas Monte Carlo

Python script to combine the statistical results of a TOPAS simulation that was split up into multiple batches.

Cell Models for TOPAS/Geant4 and the inclusion of nano particles in particle scattering simulations. The C++ classes in this repository extend the functionality of the TOPAS (http://www.topasmc.org/) MC program, which is itself a wrapper of the Geant4 MCS Toolkit (http://geant4.org).

Converts binned TOPAS data to useful Matlab data.

code to read electron phase spaces in python, perform some basic analysis, and - if needed, convert them to an output format appropriate to read into either CST or topas

Python script to create a TOPAS-readable simulation file descriring a Multi-Leaf-Collimator. Builds the MLC using the data from a 3D .stl file.

TOPAS-nBio extension repository, for documentation and license see: https://topas-nbio.readthedocs.io/

Tools for Topasmc (Topas Monte-Carlo) modelling

Cell Models for TOPAS/Geant4 and the inclusion of nano particles in particle scattering simulations. The C++ classes in this repository extend the functionality of the TOPAS (http://www.topasmc.org/) MC program, which is itself a wrapper of the Geant4 MCS Toolkit (http://geant4.org).

code for the import, analysis, and export of magnetic fields

Useful tools and parameter files

Vim syntax and color files for TOPAS-MC parameter files.

A beamlet-weighted Dose to Medium scoring extension for TOPAS. This scorer is intended to be used for a 4D simulation, where each beamlet is defined by one time point. And for each time point, the BeamletWeight parameter will be updated if it changes between time points. This BeamletWeight parameter is directly multiplied on a per-hit basis with…

R package for Topas

MonteCarlo simulation of a proton CT apparatus