Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
✏️ Genome assembly polishing & SNV detection
VirusWarn-SC2 is a simple Variants of concern aLert system script for Sars-CoV2. Doc https://rki-mf1.github.io/vocal-doc/
Optimized Python and C++ implementations of INDELseek, a Perl tool for detecting complex genetic indels in NGS data, with performance improvements, validation, and benchmarking against other variant callers.
A mutation-based alert system to prioritize concerning Influenza variants from sequencing data.
Lab module and lectures for variant detection in SARS-CoV-2 using Galaxy
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