Enhancements
- support new
--isolate
mode in spades 3.14 - use
kmc
instead ofmash
for faster genome size estimation - modified some default parameters for better results
- auto-detection of cpu and ram
- overall faster performance
Bug fixes
- fix FASTA headers
- disable internal adaptor filtering in skesa
- faster contig correction
- fix ram management for some commands
- fix samtools temp file race condition clash