Merge pull request #51 from typhoidgenomics/dev

v1.3
typhoidgenomics · Sep 13, 2023 · 48e9eac · 48e9eac
2 parents d319fa6 + 8f7a5e1
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diff --git a/README.md b/README.md
@@ -18,7 +18,7 @@
 
 ## Description
 
-TyphiNET is a dashboard for visualising global _Salmonella_ Typhi genotype and antimicrobial resistance data. Our interface allows you to search for specific data on individual countries and over specific time periods. Data are regularly updated (last updated/curation on February 03th, 2023) from [Pathogenwatch](https://pathogen.watch/).
+TyphiNET is a dashboard for visualising global _Salmonella_ Typhi genotype and antimicrobial resistance data. Our interface allows you to search for specific data on individual countries and over specific time periods. Data are regularly updated (last updated/curation on September 12th, 2023) from [Pathogenwatch](https://pathogen.watch/).
 
 TyphiNET is available at: http://typhi.net
 
@@ -40,15 +40,19 @@ npm install -g yarn
 git clone https://github.com/zadyson/TyphiNET.git
 ```
 
-#### 4. Inside the project, folder run this command to install the server dependencies
+
+#### 4. Inside the project folder run this command to install the server dependencies
+
 
 ```sh
 npm install
 ```
 
 #### 5. Inside the folder `/client`, run the previous command to install the client dependencies
 
-#### 6. Inside the project folder, create a file named `.env`. Inside it, copy the following code
+
+#### 6. Inside the project folder, create a file named `.env`. Inside it, copy the following code.
+
 
 ```sh
 MONGO_URI= (see item 7 from the manual)

diff --git a/assets/webscrap/clean/clean.csv b/assets/webscrap/clean/clean.csv
diff --git a/assets/webscrap/clean/cleanAll.csv b/assets/webscrap/clean/cleanAll.csv
diff --git a/assets/webscrap/clean/clean_db.csv b/assets/webscrap/clean/clean_db.csv
diff --git a/client/build/asset-manifest.json b/client/build/asset-manifest.json
@@ -0,0 +1,33 @@
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+}
diff --git a/client/build/favicon.ico b/client/build/favicon.ico
diff --git a/client/build/index.html b/client/build/index.html
@@ -0,0 +1 @@
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diff --git a/client/build/legends/MapView_DominantGenotype.png b/client/build/legends/MapView_DominantGenotype.png
diff --git a/client/build/legends/MapView_NoSamples.png b/client/build/legends/MapView_NoSamples.png
diff --git a/client/build/legends/MapView_Others.png b/client/build/legends/MapView_Others.png
diff --git a/client/build/legends/MapView_Sensitive.png b/client/build/legends/MapView_Sensitive.png
diff --git a/client/build/manifest.json b/client/build/manifest.json
@@ -0,0 +1,15 @@
+{
+  "short_name": "TyphiNET",
+  "name": "TyphiNET",
+  "icons": [
+    {
+      "src": "favicon.ico",
+      "sizes": "64x64 32x32 24x24 16x16",
+      "type": "image/x-icon"
+    }
+  ],
+  "start_url": ".",
+  "display": "standalone",
+  "theme_color": "#000000",
+  "background_color": "#ffffff"
+}
diff --git a/client/build/robots.txt b/client/build/robots.txt
@@ -0,0 +1,3 @@
+# https://www.robotstxt.org/robotstxt.html
+User-agent: *
+Disallow:
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