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Convert 2 remaining ccpp prod tests (debug cold and warm) to rt.sh #88

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merged 8 commits into from
May 11, 2020
Merged

Convert 2 remaining ccpp prod tests (debug cold and warm) to rt.sh #88

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aa4fdf9
Initial commit
MinsukJi-NOAA May 6, 2020
b77b949
Add RT results on Hera
MinsukJi-NOAA May 7, 2020
2ae39d8
Add a modulefile for debug build on orion
MinsukJi-NOAA May 8, 2020
2d65cb0
Add RT results on Orion
MinsukJi-NOAA May 8, 2020
267cc75
Incorporate NEMS change (PR #61)
MinsukJi-NOAA May 11, 2020
218c55a
Add S2S RT results on Hera
MinsukJi-NOAA May 11, 2020
8f91cfd
Point NEMS to NOAA-EMC/NEMS develop
MinsukJi-NOAA May 11, 2020
58c4e5b
Updated NEMS submodule to latest develop
MinsukJi-NOAA May 11, 2020
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56 changes: 56 additions & 0 deletions modulefiles/orion.intel/fv3_coupled_debug
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#%Module######################################################################
##
## NEMS FV3 Prerequisites: Orion/Intel

proc ModulesHelp {} {
puts stderr "\tcit - loads modules required for building and running FV3 under NEMS on Orion/Intel"
}

module-whatis "loads NEMS FV3 prerequisites for Orion/Intel"
##
## load contrib environment
## load slurm utils (arbitrary.pl layout.pl)
##
module load contrib noaatools

##
## load programming environment
## this typically includes compiler, MPI and job scheduler
##
module load intel/2018
module load impi/2018

##
## NCEP libraries (temporary version to match the CCPP requirements)
##
module use /apps/contrib/NCEPLIBS/orion/modulefiles
module load bacio/2.0.3
module load ip/3.0.2
module load nemsio/2.2.4
module load sp/2.0.3
module load w3emc/2.4.0
module load w3nco/2.0.7
module load g2/3.1.1
module load g2tmpl/1.6.0
module load crtm/2.3.0
module load jasper/1.900.2
module load png/1.2.44
module load z/1.2.6

##
## load ESMF library for above compiler / MPI combination
## use pre-compiled EMSF library for above compiler / MPI combination
##
module use /apps/contrib/NCEPLIBS/lib/modulefiles
module load netcdfp/4.7.4
module load esmflocal/8_0_0.g
module load post-intel-sandybridge/8.0.5

##
### load cmake
###
module load cmake/3.15.4
setenv CMAKE_C_COMPILER mpiicc
setenv CMAKE_CXX_COMPILER mpiicpc
setenv CMAKE_Fortran_COMPILER mpiifort
setenv CMAKE_Platform orion.intel
22,153 changes: 17,873 additions & 4,280 deletions tests/Compile_hera.intel.log
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21,547 changes: 15,581 additions & 5,966 deletions tests/Compile_orion.intel.log
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183 changes: 168 additions & 15 deletions tests/RegressionTests_hera.intel.log
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183 changes: 168 additions & 15 deletions tests/RegressionTests_orion.intel.log
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7 changes: 7 additions & 0 deletions tests/compile.sh
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Expand Up @@ -20,6 +20,13 @@ PATHTR=${PATHTR:-$(cd ${compile_root_dir}/.. && pwd)}
echo "PATHTR is $PATHTR"
cd ${PATHTR}/NEMS

if [[ ${app_name} =~ _debug ]]; then
S2S_DEBUG_MODULE=true
else
S2S_DEBUG_MODULE=false
fi
export S2S_DEBUG_MODULE

if [[ ${clean_before} == YES ]]; then
make app=${app_name} distclean
fi
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4 changes: 4 additions & 0 deletions tests/rt.conf
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Expand Up @@ -14,3 +14,7 @@ COMPILE | coupledFV3_CCPP_MOM6_CICE_WW3 | | hera.intel | fv3
COMPILE | coupledFV3_CCPP_MOM6_CICE_WW3 | | orion.intel | fv3 |
RUN | cpld_fv3_ccpp_384_mom6_cice_ww3_cold_bmark_rt | | | fv3 |
RUN | cpld_fv3_ccpp_384_mom6_cice_ww3_1d_bmark_rt | | | fv3 |
COMPILE | coupledFV3_CCPP_MOM6_CICE_debug | | hera.intel | fv3 |
COMPILE | coupledFV3_CCPP_MOM6_CICE_debug | | orion.intel | fv3 |
RUN | cpld_fv3_ccpp_mom6_cice_cold_debug | | | fv3 |
RUN | cpld_fv3_ccpp_mom6_cice_6h_debug | | | fv3 |
110 changes: 110 additions & 0 deletions tests/tests/cpld_fv3_ccpp_mom6_cice_6h_debug
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#
# CPLD_FV3_CCPP_MOM6_CICE_6H_DEBUG test
#

export TEST_DESCR="Fully coupled FV3-CCPP-MOM6-CICE system - warm debug"

export CNTL_DIR="RT-Baselines_6h_warm_debug_ccpp"
export CNTLMED_DIR="RT-Baselines_6h_warm_debug_ccpp/RESTART"

export LIST_FILES="phyf006.tile1.nc \
phyf006.tile2.nc \
phyf006.tile3.nc \
phyf006.tile4.nc \
phyf006.tile5.nc \
phyf006.tile6.nc \
dynf006.tile1.nc \
dynf006.tile2.nc \
dynf006.tile3.nc \
dynf006.tile4.nc \
dynf006.tile5.nc \
dynf006.tile6.nc \
RESTART/coupler.res \
RESTART/fv_core.res.nc \
RESTART/fv_core.res.tile1.nc \
RESTART/fv_core.res.tile2.nc \
RESTART/fv_core.res.tile3.nc \
RESTART/fv_core.res.tile4.nc \
RESTART/fv_core.res.tile5.nc \
RESTART/fv_core.res.tile6.nc \
RESTART/fv_srf_wnd.res.tile1.nc \
RESTART/fv_srf_wnd.res.tile2.nc \
RESTART/fv_srf_wnd.res.tile3.nc \
RESTART/fv_srf_wnd.res.tile4.nc \
RESTART/fv_srf_wnd.res.tile5.nc \
RESTART/fv_srf_wnd.res.tile6.nc \
RESTART/fv_tracer.res.tile1.nc \
RESTART/fv_tracer.res.tile2.nc \
RESTART/fv_tracer.res.tile3.nc \
RESTART/fv_tracer.res.tile4.nc \
RESTART/fv_tracer.res.tile5.nc \
RESTART/fv_tracer.res.tile6.nc \
RESTART/phy_data.tile1.nc \
RESTART/phy_data.tile2.nc \
RESTART/phy_data.tile3.nc \
RESTART/phy_data.tile4.nc \
RESTART/phy_data.tile5.nc \
RESTART/phy_data.tile6.nc \
RESTART/sfc_data.tile1.nc \
RESTART/sfc_data.tile2.nc \
RESTART/sfc_data.tile3.nc \
RESTART/sfc_data.tile4.nc \
RESTART/sfc_data.tile5.nc \
RESTART/sfc_data.tile6.nc \
MOM6_RESTART/MOM.res.nc \
MOM6_RESTART/MOM.res_1.nc \
MOM6_RESTART/MOM.res_2.nc \
MOM6_RESTART/MOM.res_3.nc \
restart/iced.2016-10-03-21600.nc \
mediator_FBaccumAtm_restart.tile1.nc \
mediator_FBaccumAtm_restart.tile2.nc \
mediator_FBaccumAtm_restart.tile3.nc \
mediator_FBaccumAtm_restart.tile4.nc \
mediator_FBaccumAtm_restart.tile5.nc \
mediator_FBaccumAtm_restart.tile6.nc \
mediator_FBaccumOcn_restart.nc \
mediator_FBaccumIce_restart.nc \
mediator_FBaccumLnd_restart.nc \
mediator_FBaccumHyd_restart.nc \
mediator_FBaccumAtmOcn_restart.nc \
mediator_FBAtm_a_restart.tile1.nc \
mediator_FBAtm_a_restart.tile2.nc \
mediator_FBAtm_a_restart.tile3.nc \
mediator_FBAtm_a_restart.tile4.nc \
mediator_FBAtm_a_restart.tile5.nc \
mediator_FBAtm_a_restart.tile6.nc \
mediator_FBIce_i_restart.nc \
mediator_FBOcn_o_restart.nc \
mediator_FBLnd_l_restart.nc \
mediator_FBHyd_h_restart.nc \
mediator_FBAtmOcn_o_restart.nc \
mediator_scalars_restart.txt"

export_fv3
export_cpl

export DAYS="0.25"
export FHMAX="6"
export NFHOUT_HF="1"
export FDIAG="6"
export WLCLK=30

# set component and coupling timesteps
export DT_CICE=${DT_ATMOS}
export CPL_SLOW=${DT_THERM_MOM6}
export CPL_FAST=${DT_ATMOS}

# write a CICE restart at DAYS
export DUMPFREQ_N=${FHMAX}
export DUMPFREQ="h"

# nems.configure
export NEMS_CONFIGURE="nems.configure.med_atm_ocn_ice.IN"
export coupling_interval_slow_sec=${CPL_SLOW}
export coupling_interval_fast_sec=${CPL_FAST}

export FV3_RUN=cpld_fv3_mom6_cice_atm_flux_run.IN
export INPUT_NML=input.mom6_ccpp.nml.IN

export SUITE_NAME="FV3_GFS_2017_coupled"
export MED_restart_data='MEDIATOR_debug_ccpp'
101 changes: 101 additions & 0 deletions tests/tests/cpld_fv3_ccpp_mom6_cice_cold_debug
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#
# CPLD_FV3_CCPP_MOM6_CICE_COLD_ATM_FLUX test
#

export TEST_DESCR="Fully coupled FV3-CCPP-MOM6-CICE system - cold debug"

export CNTL_DIR="RT-Baselines_cold_debug_ccpp"
export CNTLMED_DIR="MEDIATOR_debug_ccpp"

export LIST_FILES="phyf001.tile1.nc \
phyf001.tile2.nc \
phyf001.tile3.nc \
phyf001.tile4.nc \
phyf001.tile5.nc \
phyf001.tile6.nc \
dynf001.tile1.nc \
dynf001.tile2.nc \
dynf001.tile3.nc \
dynf001.tile4.nc \
dynf001.tile5.nc \
dynf001.tile6.nc \
RESTART/coupler.res \
RESTART/fv_core.res.nc \
RESTART/fv_core.res.tile1.nc \
RESTART/fv_core.res.tile2.nc \
RESTART/fv_core.res.tile3.nc \
RESTART/fv_core.res.tile4.nc \
RESTART/fv_core.res.tile5.nc \
RESTART/fv_core.res.tile6.nc \
RESTART/fv_srf_wnd.res.tile1.nc \
RESTART/fv_srf_wnd.res.tile2.nc \
RESTART/fv_srf_wnd.res.tile3.nc \
RESTART/fv_srf_wnd.res.tile4.nc \
RESTART/fv_srf_wnd.res.tile5.nc \
RESTART/fv_srf_wnd.res.tile6.nc \
RESTART/fv_tracer.res.tile1.nc \
RESTART/fv_tracer.res.tile2.nc \
RESTART/fv_tracer.res.tile3.nc \
RESTART/fv_tracer.res.tile4.nc \
RESTART/fv_tracer.res.tile5.nc \
RESTART/fv_tracer.res.tile6.nc \
RESTART/phy_data.tile1.nc \
RESTART/phy_data.tile2.nc \
RESTART/phy_data.tile3.nc \
RESTART/phy_data.tile4.nc \
RESTART/phy_data.tile5.nc \
RESTART/phy_data.tile6.nc \
RESTART/sfc_data.tile1.nc \
RESTART/sfc_data.tile2.nc \
RESTART/sfc_data.tile3.nc \
RESTART/sfc_data.tile4.nc \
RESTART/sfc_data.tile5.nc \
RESTART/sfc_data.tile6.nc \
mediator_FBaccumAtm_restart.tile1.nc \
mediator_FBaccumAtm_restart.tile2.nc \
mediator_FBaccumAtm_restart.tile3.nc \
mediator_FBaccumAtm_restart.tile4.nc \
mediator_FBaccumAtm_restart.tile5.nc \
mediator_FBaccumAtm_restart.tile6.nc \
mediator_FBaccumOcn_restart.nc \
mediator_FBaccumIce_restart.nc \
mediator_FBaccumLnd_restart.nc \
mediator_FBaccumHyd_restart.nc \
mediator_FBaccumAtmOcn_restart.nc \
mediator_FBAtm_a_restart.tile1.nc \
mediator_FBAtm_a_restart.tile2.nc \
mediator_FBAtm_a_restart.tile3.nc \
mediator_FBAtm_a_restart.tile4.nc \
mediator_FBAtm_a_restart.tile5.nc \
mediator_FBAtm_a_restart.tile6.nc \
mediator_FBIce_i_restart.nc \
mediator_FBOcn_o_restart.nc \
mediator_FBLnd_l_restart.nc \
mediator_FBHyd_h_restart.nc \
mediator_FBAtmOcn_o_restart.nc \
mediator_scalars_restart.txt"

export_fv3
export_cpl

export DAYS="0.041666666"
export FHMAX="1" # Note this needs to be at least 2x CPL_SLOW

# set component and coupling timesteps
export DT_CICE=${DT_ATMOS}
export CPL_SLOW=${DT_THERM_MOM6}
export CPL_FAST=${DT_ATMOS}

# write a CICE restart at FHMAX
export DUMPFREQ_N=${FHMAX}
export DUMPFREQ="h"

# nems.configure
export NEMS_CONFIGURE="nems.configure.medcold_atm_ocn_ice.IN"
export coupling_interval_slow_sec=${CPL_SLOW}
export coupling_interval_fast_sec=${CPL_FAST}

export FV3_RUN=cpld_fv3_mom6_cice_atm_flux_run.IN
export INPUT_NML=input.mom6_ccpp.nml.IN

export SUITE_NAME="FV3_GFS_2017_coupled"