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[aqm_dev] AQM v8 with CMAQ5.4 updates #1135

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[aqm_dev] AQM v8 with CMAQ5.4 updates #1135

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2 changes: 1 addition & 1 deletion modulefiles/build_hera_intel.lua
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Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ the NOAA RDHPC machine Hera using Intel-2022.1.2

whatis([===[Loads libraries needed for building the SRW workflow on Hera ]===])

prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.5.0/envs/unified-env-rocky8/install/modulefiles/Core")
prepend_path("MODULEPATH", "/scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.5.0/envs/fms-2024.01/install/modulefiles/Core")
prepend_path("MODULEPATH", "/scratch1/NCEPDEV/jcsda/jedipara/spack-stack/modulefiles")

load(pathJoin("stack-intel", "2021.5.0"))
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3 changes: 2 additions & 1 deletion modulefiles/wflow_hera.lua
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Expand Up @@ -7,7 +7,8 @@ whatis([===[Loads libraries needed for running the UFS SRW App on Hera ]===])

load("rocoto")

prepend_path("MODULEPATH","/scratch1/NCEPDEV/nems/role.epic/miniconda3/modulefiles")
prepend_path("MODULEPATH","/contrib/miniconda3/modulefiles")
--load("miniconda3/4.12.0")
load(pathJoin("miniconda3", os.getenv("miniconda3_ver") or "4.12.0"))

if mode() == "load" then
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13 changes: 9 additions & 4 deletions parm/aqm.rc
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Expand Up @@ -7,15 +7,19 @@
#
# General settings
#
ae_matrix_nml: {{ aqm_config_dir }}/AE_cb6r3_ae6_aq.nml
gc_matrix_nml: {{ aqm_config_dir }}/GC_cb6r3_ae6_aq.nml
nr_matrix_nml: {{ aqm_config_dir }}/NR_cb6r3_ae6_aq.nml
ae_matrix_nml: {{ aqm_config_dir }}/AE_cb6r5_ae7_aq.nml
gc_matrix_nml: {{ aqm_config_dir }}/GC_cb6r5_ae7_aq.nml
nr_matrix_nml: {{ aqm_config_dir }}/NR_cb6r5_ae7_aq.nml
tr_matrix_nml: {{ aqm_config_dir }}/Species_Table_TR_0.nml

csqy_data: {{ aqm_config_dir }}/CSQY_DATA_cb6r3_ae6_aq
csqy_data: {{ aqm_config_dir }}/CSQY_DATA_cb6r5_ae7_aq
optics_data: {{ aqm_config_dir }}/PHOT_OPTICS.dat
omi_data: {{ aqm_config_dir }}/omi_cmaq_2015_361X179.dat

desid_chem_ctrl: {{ aqm_config_dir }}/CMAQ_Control_DESID_cb6r5_ae7_aq.nml
desid_ctrl: {{ aqm_config_dir }}/CMAQ_Control_DESID.nml
misc_ctrl: {{ aqm_config_dir }}/CMAQ_Control_Misc.nml

init_concentrations: {{ init_concentrations | lower }}

run_aerosol: true
Expand Down Expand Up @@ -87,6 +91,7 @@ anthro_species::
ALD2 1.00000 ALD2 KG/M2/S
ALD2_PRIMARY 1.00000 ALD2_PRIMARY KG/M2/S
ALDX 1.00000 ALDX KG/M2/S
APIN 1.00000 APIN KG/M2/S
BENZ 1.00000 BENZ KG/M2/S
BUTADIENE13 1.00000 BUTADIENE13 KG/M2/S
CH4 1.00000 CH4 KG/M2/S
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70 changes: 38 additions & 32 deletions parm/diag_table_aqm.FV3_GFS_v16
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Expand Up @@ -363,28 +363,40 @@
#"gfs_dyn", "tolu", "tolu", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "hg", "hg", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "hgiigas", "hgiigas", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apin", "apin", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "terpnro2", "terpnro2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "mtno3", "mtno3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "clo", "clo", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "clno3", "clno3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svavb1", "svavb1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svavb2", "svavb2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svavb3", "svavb3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svavb4", "svavb4", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "DMS", "DMS", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "MSA", "MSA", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aso4j", "aso4j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aso4i", "aso4i", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "anh4j", "anh4j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "anh4i", "anh4i", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "ano3j", "ano3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "ano3i", "ano3i", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aalk1j", "aalk1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aalk2j", "aalk2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "axyl1j", "axyl1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "axyl2j", "axyl2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "axyl3j", "axyl3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atol1j", "atol1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atol2j", "atol2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atol3j", "atol3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "abnz1j", "abnz1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "abnz2j", "abnz2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "abnz3j", "abnz3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apah1j", "apah1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apah2j", "apah2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apah3j", "apah3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atrp1j", "atrp1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "atrp2j", "atrp2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aorgh2oj", "aorgh2oj", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amtno3j", "amtno3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amthydj", "amthydj", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apoci", "apoci", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apocj", "apocj", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apncomi", "apncomi", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "apncomj", "apncomj", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aavb1j", "aavb1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aavb2j", "aavb2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aavb3j", "aavb3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aavb4j", "aavb4j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt1j", "amt1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt2j", "amt2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt3j", "amt3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt4j", "amt4j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt5j", "amt5j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "amt6j", "amt6j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aiso1j", "aiso1j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "aiso2j", "aiso2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "asqtj", "asqtj", "fv3_history", "all", .false., "none", 2
Expand Down Expand Up @@ -447,22 +459,16 @@
#"gfs_dyn", "asvoo2j", "asvoo2j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "asvoo3j", "asvoo3j", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "nh3", "nh3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_alk1", "sv_alk1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_alk2", "sv_alk2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_xyl1", "sv_xyl1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_xyl2", "sv_xyl2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_tol1", "sv_tol1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_tol2", "sv_tol2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_bnz1", "sv_bnz1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_bnz2", "sv_bnz2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_pah1", "sv_pah1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_pah2", "sv_pah2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_trp1", "sv_trp1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_trp2", "sv_trp2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_iso1", "sv_iso1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_iso2", "sv_iso2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sv_sqt", "sv_sqt", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "lv_pcsog", "lv_pcsog", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sviso1", "sviso1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "sviso2", "sviso2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svsqt", "svsqt", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "lvpcsog", "lvpcsog", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt1", "svmt1", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt2", "svmt2", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt3", "svmt3", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt4", "svmt4", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt5", "svmt5", "fv3_history", "all", .false., "none", 2
#"gfs_dyn", "svmt6", "svmt6", "fv3_history", "all", .false., "none", 2
"gfs_dyn", "o3_ave", "o3_ave", "fv3_history", "all", .false., "none", 2
"gfs_dyn", "no_ave", "no_ave", "fv3_history", "all", .false., "none", 2
"gfs_dyn", "no2_ave", "no2_ave", "fv3_history", "all", .false., "none", 2
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