Update rasmgshoc test, add rasmgshoc debug test, add to rt.conf and r…

…t_gnu.conf

tests/fv3_conf/rasmgshoc_run.IN

@@ -1,19 +1,69 @@
+rm -fr INPUT RESTART
+if [ $NPX = 97 ]; then
+  inputdir=FV3_input_data
+elif [ $NPX = 193 ]; then
+  inputdir=FV3_input_data192
+elif [ $NPX = 385 ]; then
+  inputdir=FV3_input_data384
+elif [ $NPX = 769 ]; then
+  inputdir=FV3_input_data_c768
+fi
+echo "inputdir=$inputdir,NPX=$NPX"
 
+UNIT_TEST=${UNIT_TEST:-false}
+SUFFIX=${RT_SUFFIX}
 if [ $WARM_START = .F. ]; then
-  cp -r @[INPUTDATA_ROOT]/FV3_input_data/INPUT .
+  cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT .
   mkdir RESTART
 else
   mkdir INPUT RESTART
-  cp -r @[INPUTDATA_ROOT]/FV3_input_data/RESTART/* ./INPUT
+
+  if [[ ${UNIT_TEST} == true ]]; then
+    SUFFIX=${BL_SUFFIX}
+  fi
+
+  rsync -arv ../fv3_rasmgshoc${SUFFIX}/RESTART/ INPUT/
+  if [[ $IAU_INC_FILES = 'fv3_increment.nc' ]] || [[ $READ_INCREMENT = '.T.' ]]; then
+    #read_inc and iau tests restart from fh=24
+    cp ../fv3_rasmgshoc${SUFFIX}/RESTART/coupler.res INPUT/.
+    cp ../fv3_rasmgshoc${SUFFIX}/RESTART/fv_core.res.* INPUT/.
+    cp ../fv3_rasmgshoc${SUFFIX}/RESTART/fv_srf_wnd.res.* INPUT/.
+    cp ../fv3_rasmgshoc${SUFFIX}/RESTART/fv_tracer.* INPUT/.
+    cp ../fv3_rasmgshoc${SUFFIX}/RESTART/phy_data.* INPUT/.
+    cp ../fv3_rasmgshoc${SUFFIX}/RESTART/sfc_data.* INPUT/.
+    cp ../fv3_rasmgshoc${SUFFIX}/INPUT/fv3_increment.nc INPUT/.
+    cd INPUT
+  else
+    #restart test start from fh=12
+    cp ../fv3_rasmgshoc${SUFFIX}/RESTART/20161003.120000.* INPUT/.
+    cd INPUT
+    for RFILE in 20161003.120000.*; do
+      [ -e $RFILE ] || exit 1
+      mv $RFILE ${RFILE#20161003.120000.}
+    done
+  fi
+  cp ../../fv3_rasmgshoc${SUFFIX}/INPUT/grid_spec.nc .
+  cp ../../fv3_rasmgshoc${SUFFIX}/INPUT/*_grid.tile*.nc .
+  cp ../../fv3_rasmgshoc${SUFFIX}/INPUT/oro_data.tile*.nc .
+  cd ..
+
 fi
-cp    @[INPUTDATA_ROOT]/FV3_input_data/INPUT/aerosol.dat .
-cp    @[INPUTDATA_ROOT]/FV3_input_data/INPUT/co2historicaldata_201*.txt .
-cp    @[INPUTDATA_ROOT]/FV3_input_data/INPUT/sfc_emissivity_idx.txt .
-cp    @[INPUTDATA_ROOT]/FV3_input_data/INPUT/solarconstant_noaa_an.txt .
-cp    @[INPUTDATA_ROOT]/FV3_input_data/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
-cp    @[INPUTDATA_ROOT]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
-cp    @[INPUTDATA_ROOT]/FV3_input_data/*grb .
-cp    @[INPUTDATA_ROOT]/FV3_input_data/*_table .
-cp    @[INPUTDATA_ROOT]/FV3_input_data/diag_table_mgtkers    diag_table
-cp    @[INPUTDATA_ROOT]/FV3_input_data/field_table_rasmgshoc field_table
-cp    @[INPUTDATA_ROOT]/FV3_input_data/*configure .
+
+cp    @[INPUTDATA_ROOT]/${inputdir}/INPUT/aerosol.dat .
+cp    @[INPUTDATA_ROOT]/${inputdir}/INPUT/co2historicaldata_201*.txt .
+cp    @[INPUTDATA_ROOT]/${inputdir}/INPUT/sfc_emissivity_idx.txt .
+cp    @[INPUTDATA_ROOT]/${inputdir}/INPUT/solarconstant_noaa_an.txt .
+if [ $OZ_PHYS_NEW = .T. ]; then
+  cp  @[INPUTDATA_ROOT]/${inputdir}/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
+elif [ $OZ_PHYS_OLD = .T. ]; then
+  cp  @[INPUTDATA_ROOT]/${inputdir}/INPUT/global_o3prdlos.f77 .
+fi
+if [ $H2O_PHYS = .T. ]; then
+  cp  @[INPUTDATA_ROOT]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
+fi
+cp    @[INPUTDATA_ROOT]/${inputdir}/*grb .
+cp    @[INPUTDATA_ROOT]/${inputdir}/*_table .
+cp    @[INPUTDATA_ROOT]/${inputdir}/diag_table_mgtkers    diag_table
+cp    @[INPUTDATA_ROOT]/${inputdir}/field_table_rasmgshoc field_table
+cp    @[INPUTDATA_ROOT]/${inputdir}/*configure .
+