118 orthanc reciever agent to download stable studies

[mbrzus]

Overview

This pull request introduces the fully functional system orchestrating the orthanc PACS servers with the example medical imaging product and connected to the TrackerAPI system.

This includes:

1. our internal Orthanc PACS server
2. "fake" hospital PACS server
3. Orthanc Receiver Agent: an agent listening for new connections to our internal server. The agent manages the full data lifecycle within our system:
   • data receiving managment
   • data download to local system
   • data processing calling the example product
   • data upload to internal PACS
   • data return to the hospital
   • data deletion
4. Othanc Logger: logs all study events to trackerAPI system

Testing

in your local environment:

1. Start your virtual environments
2. Start the PACS servers and upload example data
   bash example_tool/Orthanc/tmux_startup.sh
3. Start the receiver agent
   python3 internal_servers/orthanc_reciever_agent.py
4. Send data to modality in example hospital orthanc (manual click on the website)
5. The agent will perform all the work automatically

Closes #24
Closes #34
Closes #35
Closes #61
Closes #68

[zmorris248]

This looks really good! I think it needs to be rebased with main and made sure that the orthanc receiving and logging agents have the updated functionality and retested

[mbrzus]

This looks really good! I think it needs to be rebased with main and made sure that the orthanc receiving and logging agents have the updated functionality and retested

I rebased with main.

Additionally, we might want to rename parts of the codebase from job to study. For example I still see the class from trackerAPI called JobConfigManager

[sonarqubecloud]

Quality Gate passed

Issues
1 New issue
0 Accepted issues

Measures
0 Security Hotspots
No data about Coverage
0.0% Duplication on New Code

See analysis details on SonarCloud

[Ivan-E-Johnson]

Looks Good