Skip to content
@umccr

UMCCR

University of Melbourne Centre for Cancer Research

Pinned Loading

  1. htsget-rs htsget-rs Public

    A server implementation of the htsget protocol for bioinformatics in Rust

    Rust 39 9

  2. infrastructure infrastructure Public

    Infrastructure as Code at UMCCR

    Python 10 8

  3. cwl-ica cwl-ica Public

    A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide

    Common Workflow Language 8 2

  4. data-portal-apis data-portal-apis Public

    UMCCR Data Portal API Backend in cloud native serverless

    Python 1

  5. orcabus orcabus Public

     🐋 UMCCR Pipeline & Workflow Orchestration

    Python 4

  6. RNAsum RNAsum Public

    Pipeline for generating RNAseq-based cancer patient reports

    R 7 4

Repositories

Showing 10 of 128 repositories
  • cwl-ica Public

    A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide

    umccr/cwl-ica’s past year of commit activity
    Common Workflow Language 8 MIT 2 7 5 Updated Nov 22, 2024
  • orcabus Public

     🐋 UMCCR Pipeline & Workflow Orchestration

    umccr/orcabus’s past year of commit activity
    Python 4 0 48 (1 issue needs help) 6 Updated Nov 22, 2024
  • infrastructure Public

    Infrastructure as Code at UMCCR

    umccr/infrastructure’s past year of commit activity
    Python 10 8 13 4 Updated Nov 22, 2024
  • htsget-rs Public

    A server implementation of the htsget protocol for bioinformatics in Rust

    umccr/htsget-rs’s past year of commit activity
    Rust 39 MIT 9 19 4 Updated Nov 22, 2024
  • data-portal-client Public

    UMCCR Data Portal Frontend

    umccr/data-portal-client’s past year of commit activity
    TypeScript 1 1 6 2 Updated Nov 19, 2024
  • cwl-novice-tutorial Public

    CWL Novice Tutorial

    umccr/cwl-novice-tutorial’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 19, 2024
  • rportal Public

    🔮 R functionality for UMCCR Data Portal

    umccr/rportal’s past year of commit activity
    R 0 0 0 0 Updated Nov 18, 2024
  • umccr/samplesheet-check-backend’s past year of commit activity
    Python 0 0 2 1 Updated Nov 18, 2024
  • steps-s3-copy Public

    A Steps orchestration for copying large volumes of S3 objects

    umccr/steps-s3-copy’s past year of commit activity
    TypeScript 0 MIT 0 2 0 Updated Nov 15, 2024
  • gpgr Public

    📚 Genomics Platform Group Reporter

    umccr/gpgr’s past year of commit activity
    R 8 1 0 1 Updated Nov 14, 2024

Top languages

Loading…

Most used topics

Loading…