Skip to content
@umich-brcf-bioinf

UM BRCF Bioinformatics Core

Popular repositories Loading

  1. Connor Connor Public

    Deduplication based on custom inline DNA barcodes.

    Python 21 5

  2. Jacquard Jacquard Public

    Suite of command-line tools to expedite analysis of exome variant data from multiple patients and multiple variant callers.

    Python 7 2

  3. Katana Katana Public

    Command-line tool to soft-clip reads based on primer locations.

    Python 5 3

  4. Watermelon Watermelon Public

    RNA-Seq NGS Pipeline

    Python 3

  5. single_cell_env single_cell_env Public

    An environment for single-cell RNAseq

    Dockerfile 2

  6. 2021-04-26-umich-rnaseqDemystified 2021-04-26-umich-rnaseqDemystified Public

    RNA-Seq Demystified workshop

    HTML 2 1

Repositories

Showing 10 of 70 repositories
  • workshop-intro-single-cell Public

    Intro to Single Cell Workshop lesson plans

    umich-brcf-bioinf/workshop-intro-single-cell’s past year of commit activity
    HTML 0 CC-BY-4.0 0 4 0 Updated Dec 14, 2024
  • rcom_nlp_env Public

    Docker container for Reproducible Computing workshop - Natural Language Processing (NLP) tools

    umich-brcf-bioinf/rcom_nlp_env’s past year of commit activity
    Dockerfile 0 MIT 0 0 0 Updated Nov 10, 2024
  • workshop-computational-foundations Public
    umich-brcf-bioinf/workshop-computational-foundations’s past year of commit activity
    HTML 0 0 0 1 Updated Nov 5, 2024
  • single_cell_env Public

    An environment for single-cell RNAseq

    umich-brcf-bioinf/single_cell_env’s past year of commit activity
    Dockerfile 2 0 0 0 Updated Oct 9, 2024
  • workshop-klippy Public Forked from RLesur/klippy

    Copy to Clipboard Buttons for RMarkdown HTML Documents

    umich-brcf-bioinf/workshop-klippy’s past year of commit activity
    R 0 MIT 12 0 0 Updated Sep 24, 2024
  • Watermelon Public

    RNA-Seq NGS Pipeline

    umich-brcf-bioinf/Watermelon’s past year of commit activity
    Python 3 Apache-2.0 0 2 1 Updated Sep 24, 2024
  • workshop-rnaseq-demystified Public
    umich-brcf-bioinf/workshop-rnaseq-demystified’s past year of commit activity
    HTML 0 CC-BY-4.0 0 0 0 Updated Aug 7, 2024
  • proteomics_env Public
    umich-brcf-bioinf/proteomics_env’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Jul 24, 2024
  • rsem_star Public

    Environment with rsem and star

    umich-brcf-bioinf/rsem_star’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Mar 6, 2024
  • WAT_diffex Public

    Environment for Watermelon's differential expression steps

    umich-brcf-bioinf/WAT_diffex’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Feb 7, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…