improvement: add Atoms.clone() and remove sites by indices, including in-place. Use develop branch for the PR.
#1375
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, conda-incubator/setup-miniconda@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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