Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Allow URLs to be inputted as BED files #329

Merged
merged 16 commits into from
Aug 30, 2023
Merged

Allow URLs to be inputted as BED files #329

merged 16 commits into from
Aug 30, 2023

Commits on Aug 3, 2023

  1. allow selection dropdown to have creatable elements

    @ducku
    ducku committed Aug 3, 2023
    Configuration menu
    Copy the full SHA
    485c780 View commit details
    Browse the repository at this point in the history

Commits on Aug 9, 2023

  1. add processing bed URLs

    @ducku
    ducku committed Aug 9, 2023
    Configuration menu
    Copy the full SHA
    9df4962 View commit details
    Browse the repository at this point in the history

Commits on Aug 13, 2023

  1. restore progress

    @ducku
    ducku committed Aug 13, 2023
    Configuration menu
    Copy the full SHA
    c518ef5 View commit details
    Browse the repository at this point in the history

Commits on Aug 14, 2023

  1. prepare_chunk now includes chunk file names in chunk directory

    @ducku
    ducku committed Aug 14, 2023
    Configuration menu
    Copy the full SHA
    37dd0fc View commit details
    Browse the repository at this point in the history

Commits on Aug 16, 2023

  1. implement download file

    @ducku
    ducku committed Aug 16, 2023
    Configuration menu
    Copy the full SHA
    74bb5d9 View commit details
    Browse the repository at this point in the history

  2. let server get chunk path from temp directory

    @ducku
    ducku committed Aug 16, 2023
    Configuration menu
    Copy the full SHA
    0718503 View commit details
    Browse the repository at this point in the history

Commits on Aug 18, 2023

  1. allow tracks to autofill from downloaded chunks

    @ducku
    ducku committed Aug 18, 2023
    Configuration menu
    Copy the full SHA
    86739f2 View commit details
    Browse the repository at this point in the history

Commits on Aug 21, 2023

  1. fetch get wrapper and safer url concatenation

    @ducku
    ducku committed Aug 21, 2023
    Configuration menu
    Copy the full SHA
    2ac003e View commit details
    Browse the repository at this point in the history

Commits on Aug 23, 2023

  1. chunks from bedURLs are downloaded as needed, instead of all at once … 

    …up front
    @ducku
    ducku committed Aug 23, 2023
    Configuration menu
    Copy the full SHA
    02575e2 View commit details
    Browse the repository at this point in the history

Commits on Aug 25, 2023

  1. temporary directories containing downloaded chunk data are now hashed… 

    …, go button doesn't work without tracks
    @ducku
    ducku committed Aug 25, 2023
    Configuration menu
    Copy the full SHA
    734185c View commit details
    Browse the repository at this point in the history

  2. use strict equality

    @ducku
    ducku committed Aug 25, 2023
    Configuration menu
    Copy the full SHA
    8230ea9 View commit details
    Browse the repository at this point in the history

Commits on Aug 30, 2023

  1. Merge remote-tracking branch 'origin/master' into HEAD

    @adamnovak
    adamnovak committed Aug 30, 2023
    Configuration menu
    Copy the full SHA
    f3ff321 View commit details
    Browse the repository at this point in the history

  2. Centralize BED chunk path logic, and pass URLs/paths around instead o… 

    …f directory, path or URL pairs
    @adamnovak
    adamnovak committed Aug 30, 2023
    Configuration menu
    Copy the full SHA
    f41941f View commit details
    Browse the repository at this point in the history

  3. Restore error handling middleware by eliminating async API handlers

    @adamnovak
    adamnovak committed Aug 30, 2023
    Configuration menu
    Copy the full SHA
    69a836a View commit details
    Browse the repository at this point in the history

  4. Switch to a secure hash function

    @adamnovak
    adamnovak committed Aug 30, 2023
    Configuration menu
    Copy the full SHA
    b651a29 View commit details
    Browse the repository at this point in the history

  5. Bring back cactus.bed chunk data and fix handling BED regions without… 

    … tracks
    @adamnovak
    adamnovak committed Aug 30, 2023
    Configuration menu
    Copy the full SHA
    b2161ca View commit details
    Browse the repository at this point in the history