Skip to content
This repository has been archived by the owner on Apr 19, 2023. It is now read-only.

[NEW TOOL] [scATAC-seq] BWA #243

Closed
cflerin opened this issue Oct 29, 2020 · 1 comment
Closed

[NEW TOOL] [scATAC-seq] BWA #243

cflerin opened this issue Oct 29, 2020 · 1 comment
Assignees
@cflerin
Labels
enhancement New feature or request new tool Suggestion for a new tool

Comments

@cflerin
Copy link
Member

cflerin commented Oct 29, 2020

Name of the tool
BWA, plus associated support tools: htslib, samtools

Homepage of the tool
https://github.com/lh3/bwa

Tool programming language
C

Is your tool request an alternative to another tool already in the pipeline? Please describe.
STAR, CellRanger

Describe alternatives you've considered
STAR, CellRanger
@cflerin cflerin added enhancement New feature or request new tool Suggestion for a new tool labels Oct 29, 2020
@cflerin cflerin self-assigned this Oct 29, 2020
cflerin added a commit to vib-singlecell-nf/bwamaptools that referenced this issue Oct 29, 2020
@cflerin
Add bwa mapping steps
78a2e22 
- vib-singlecell-nf/vsn-pipelines/issues/243
@cflerin cflerin mentioned this issue Nov 19, 2020
Merged
@cflerin cflerin mentioned this issue Dec 3, 2020
Merged
@cflerin
Copy link
Member Author

cflerin commented Dec 3, 2020

Completed with v0.23.0

@cflerin cflerin closed this as completed Dec 3, 2020
Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Assignees

@cflerin cflerin

Labels
enhancement New feature or request new tool Suggestion for a new tool
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@cflerin