Skip to content
This repository has been archived by the owner on Apr 19, 2023. It is now read-only.

[NEW TOOL] [scATAC-seq] BAP #246

Closed
cflerin opened this issue Oct 29, 2020 · 0 comments
Closed

[NEW TOOL] [scATAC-seq] BAP #246

cflerin opened this issue Oct 29, 2020 · 0 comments
Assignees
@cflerin
Labels
enhancement New feature or request new tool Suggestion for a new tool

Comments

@cflerin
Copy link
Member

cflerin commented Oct 29, 2020

Name of the tool
BAP

Homepage of the tool
https://github.com/caleblareau/bap

Tool programming language
Python / R

Is your tool request an alternative to another tool already in the pipeline? Please describe.
Some functionality implemented in cellranger. Needed to merge barcode multiplets and demultiplex Bio-Rad scATAC-seq data.

Describe alternatives you've considered
None
@cflerin cflerin added enhancement New feature or request new tool Suggestion for a new tool labels Oct 29, 2020
@cflerin cflerin self-assigned this Oct 29, 2020
cflerin added a commit to vib-singlecell-nf/bap that referenced this issue Oct 30, 2020
@cflerin
Add process for barcode multiplet pipeline
b088c9b 
- vib-singlecell-nf/vsn-pipelines/issues/246
@cflerin cflerin mentioned this issue Nov 19, 2020
Merged
@cflerin cflerin mentioned this issue Dec 3, 2020
Merged
@cflerin cflerin closed this as completed in 0af9541 Jul 1, 2021
Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Assignees

@cflerin cflerin

Labels
enhancement New feature or request new tool Suggestion for a new tool
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@cflerin