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Develop #194

Merged
merged 32 commits into from
Apr 3, 2020
Merged

Develop #194

merged 32 commits into from
Apr 3, 2020

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dweemx
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@dweemx dweemx commented Apr 3, 2020

Summary of changes:

KrisDavie and others added 30 commits March 18, 2020 16:02
Probably broke other cellranger functions
Fix bug sample_id not added to annotations_to_plot because not using unique values
Update 2 fly case studies: Hung et al., 2019, Kurmangaliyev et al., 2019
Add 5 new fly case studies Davie, K., Janssens, J., Koldere, D. et al., 2018, Bageritz, J., Willnow, P., Valentini, E. et al., 2019, Guo, X. et al., 2019, Ji, T., et al., 2019, Brunet Avalos, C. et al., 2019
…_feature_barcoding

Feature/180 cellranger feature barcoding
- Added a table of pipelines and better descriptions
- New release badge
…(the bump was forgotten when releasing version 0.15.1).
…le_no_bec

Feature/161 multi sample no bec
- Streamline code blocks that follow a colon
- Add horizontal dividers to visually separate sections
cflerin and others added 2 commits April 2, 2020 16:24
…using_tenx_h5_channel_not_recognized

Bugfix/191 input file using tenx h5 channel not recognized
@dweemx dweemx merged commit 17c89c9 into master Apr 3, 2020
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