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Vince Carey edited this page Oct 9, 2016 · 1 revision

geuvPack provides access to the FPKM reported for the first eQTL analysis of the GEUVADIS data.

> geuFPKM 
class: RangedSummarizedExperiment 
dim: 23722 462 
metadata(3): MIAME constrHist colDataSource
assays(1): exprs
rownames(23722): ENSG00000152931.6 ENSG00000183696.9 ...
  ENSG00000257337.1 ENSG00000177494.5
rowData names(18): source type ... tag ccdsid
colnames(462): HG00096 HG00097 ... NA20826 NA20828
colData names(35): Source.Name Comment.ENA_SAMPLE. ...  
  Factor.Value.laboratory. popcode