bugphyzz is a collection of bacterial physiological features to be used as a
resource for physiological discovery and producing signatures.
We are continuously curating bugphyzz databases through 3 main methods:
webscraping, bulk download from online databases, and manual curation from
literature. Mainly this database was concieved for analyzing microbiome data
using physiological information. Bugphyzz can allow a user to look at
specific physiologies, and create signature sets with specific bugs. The
uniform structure of the data is what allows for the latter to manifest.
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
##Release version
BiocManager::install("bugphyzz")
## Devel version
BiocManager::install("waldronlab/bugphyzz")After installation, check vignettes with:
browseVigenttes("bugphyzz")