Small fixes for variable allocation #263
Workflow file for this run
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| name: CI | |
| on: | |
| pull_request: | |
| push: | |
| branches: | |
| - develop | |
| jobs: | |
| pre-commit: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| - uses: pre-commit/action@v2.0.0 | |
| build: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| w90-binary-parallel: ["false", "true"] | |
| name: Build and test `parallel=${{ matrix.w90-binary-parallel }}` | |
| steps: | |
| - name: checkout | |
| uses: actions/checkout@v2 | |
| - name: setup python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.6 | |
| - name: install dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get -y install \ | |
| gfortran \ | |
| libblas-dev \ | |
| liblapack-dev \ | |
| openmpi-bin \ | |
| libopenmpi-dev | |
| pip install --upgrade pip | |
| pip install \ | |
| numpy \ | |
| matplotlib \ | |
| - name: build | |
| env: | |
| W90BINARYPARALLEL: ${{ matrix.w90-binary-parallel }} | |
| run: | | |
| if [ "$W90BINARYPARALLEL" == "true" ] ; then | |
| cp ./.github/workflows/config/make.inc.gfort+openmpi ./make.inc | |
| else | |
| cp ./.github/workflows/config/make.inc.gfort ./make.inc | |
| fi | |
| #make -j default w90chk2chk libs | |
| make all | |
| - name: run tests | |
| env: | |
| W90BINARYPARALLEL: ${{ matrix.w90-binary-parallel }} | |
| run: | | |
| ./.github/workflows/run_tests.sh | |
| - name: compute coverage | |
| uses: codecov/codecov-action@v1 | |
| - name: archive test results | |
| if: ${{ always() }} | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: test-results_parallel=${{ matrix.w90-binary-parallel }} | |
| path: | | |
| test-suite/tests/test*/test.err* | |
| test-suite/tests/test*/test.out* | |
| docs: | |
| name: Validate mkdocs links | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| # use the latest stable version | |
| python-version: "3.x" | |
| cache: "pip" | |
| # `pybtex` uses `pkg_resources` which is deprecated. Use workaround until upstream `mkdocs_bibtext`decides on a solution | |
| # https://github.com/shyamd/mkdocs-bibtex/issues/228 | |
| # https://bitbucket.org/pybtex-devs/pybtex/issues/169/replace-pkg_resources-with | |
| - run: pip install -r docs/requirements.txt setuptools | |
| - run: mkdocs build --strict | |
| working-directory: ./docs | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| ENABLE_MKDOCS_GIT_COMMITTERS: False |