Update xgboost requirement from ~=1.5 to >=1.5,<3.0

[dependabot]

Updates the requirements on xgboost to permit the latest version.

Release notes

Sourced from xgboost's releases.

2.0.1 Patch Release

This is a patch release for bug fixes.

Bug fixes

• Support pandas 2.1.0. by @​trivialfis in dmlc/xgboost#9655
• Fix default metric configuration. by @​trivialfis in dmlc/xgboost#9590
• [R] Fix method name. by @​trivialfis in dmlc/xgboost#9592
• Use array interface for testing NumPy arrays. by @​trivialfis in dmlc/xgboost#9635
• Workaround Apple clang issue. by @​trivialfis in dmlc/xgboost#9636
• Add support for cgroupv2. by @​trivialfis in dmlc/xgboost#9656
• Fix build for GCC 8.x by @​hcho3 in dmlc/xgboost#9670
• [pyspark] Support stage-level scheduling by @​wbo4958 in dmlc/xgboost#9686
• Fix build for AppleClang 11 by @​hcho3 in dmlc/xgboost#9684
• Fix libpath logic for Windows by @​hcho3 in dmlc/xgboost#9687, dmlc/xgboost#9711
• Remove hard dependency on libjvm by @​hcho3 in dmlc/xgboost#9705

In addition, this is the first release where the JVM package is distributed with native support for Apple Silicon.

Additional artifacts:

You can verify the downloaded packages by running the following command on your Unix shell:

echo "<hash> <artifact>" | shasum -a 256 --check

529e9d0f88c2a7abae833f05b7d1e7e7ce01de20481ea60f6ebb6eb7fc96ba69  xgboost.tar.gz
25342c91e7cda98b1362b70282b286c2e4f3e996b518fb590c1303f53f39f188  xgboost_r_gpu_win64_2.0.1.tar.gz
3d8cde1160ab135c393b8092ce0475709dff318024022b735a253d968f9711b3  xgboost_r_gpu_linux_2.0.1.tar.gz

Experimental binary packages for R with CUDA enabled

• xgboost_r_gpu_linux_2.0.1.tar.gz: Download
• xgboost_r_gpu_win64_2.0.1.tar.gz: Download

Source tarball

• xgboost.tar.gz: Download

Changelog

Sourced from xgboost's changelog.

XGBoost Change Log

This file records the changes in xgboost library in reverse chronological order.

2.0.0 (2023 Aug 16)

We are excited to announce the release of XGBoost 2.0. This note will begin by covering some overall changes and then highlight specific updates to the package.

Initial work on multi-target trees with vector-leaf outputs

We have been working on vector-leaf tree models for multi-target regression, multi-label classification, and multi-class classification in version 2.0. Previously, XGBoost would build a separate model for each target. However, with this new feature that's still being developed, XGBoost can build one tree for all targets. The feature has multiple benefits and trade-offs compared to the existing approach. It can help prevent overfitting, produce smaller models, and build trees that consider the correlation between targets. In addition, users can combine vector leaf and scalar leaf trees during a training session using a callback. Please note that the feature is still a working in progress, and many parts are not yet available. See #9043 for the current status. Related PRs: (#8538, #8697, #8902, #8884, #8895, #8898, #8612, #8652, #8698, #8908, #8928, #8968, #8616, #8922, #8890, #8872, #8889, #9509) Please note that, only the hist (default) tree method on CPU can be used for building vector leaf trees at the moment.

New device parameter.

A new device parameter is set to replace the existing gpu_id, gpu_hist, gpu_predictor, cpu_predictor, gpu_coord_descent, and the PySpark specific parameter use_gpu. Onward, users need only the device parameter to select which device to run along with the ordinal of the device. For more information, please see our document page (https://xgboost.readthedocs.io/en/stable/parameter.html#general-parameters) . For example, with device="cuda", tree_method="hist", XGBoost will run the hist tree method on GPU. (#9363, #8528, #8604, #9354, #9274, #9243, #8896, #9129, #9362, #9402, #9385, #9398, #9390, #9386, #9412, #9507, #9536). The old behavior of gpu_hist is preserved but deprecated. In addition, the predictor parameter is removed.

hist is now the default tree method

Starting from 2.0, the hist tree method will be the default. In previous versions, XGBoost chooses approx or exact depending on the input data and training environment. The new default can help XGBoost train models more efficiently and consistently. (#9320, #9353)

GPU-based approx tree method

There's initial support for using the approx tree method on GPU. The performance of the approx is not yet well optimized but is feature complete except for the JVM packages. It can be accessed through the use of the parameter combination device="cuda", tree_method="approx". (#9414, #9399, #9478). Please note that the Scala-based Spark interface is not yet supported.

Optimize and bound the size of the histogram on CPU, to control memory footprint

XGBoost has a new parameter max_cached_hist_node for users to limit the CPU cache size for histograms. It can help prevent XGBoost from caching histograms too aggressively. Without the cache, performance is likely to decrease. However, the size of the cache grows exponentially with the depth of the tree. The limit can be crucial when growing deep trees. In most cases, users need not configure this parameter as it does not affect the model's accuracy. (#9455, #9441, #9440, #9427, #9400).

Along with the cache limit, XGBoost also reduces the memory usage of the hist and approx tree method on distributed systems by cutting the size of the cache by half. (#9433)

Improved external memory support

There is some exciting development around external memory support in XGBoost. It's still an experimental feature, but the performance has been significantly improved with the default hist tree method. We replaced the old file IO logic with memory map. In addition to performance, we have reduced CPU memory usage and added extensive documentation. Beginning from 2.0.0, we encourage users to try it with the hist tree method when the memory saving by QuantileDMatrix is not sufficient. (#9361, #9317, #9282, #9315, #8457)

Learning to rank

We created a brand-new implementation for the learning-to-rank task. With the latest version, XGBoost gained a set of new features for ranking task including:

• A new parameter lambdarank_pair_method for choosing the pair construction strategy.
• A new parameter lambdarank_num_pair_per_sample for controlling the number of samples for each group.
• An experimental implementation of unbiased learning-to-rank, which can be accessed using the lambdarank_unbiased parameter.
• Support for custom gain function with NDCG using the ndcg_exp_gain parameter.
• Deterministic GPU computation for all objectives and metrics.
• NDCG is now the default objective function.
• Improved performance of metrics using caches.
• Support scikit-learn utilities for XGBRanker.
• Extensive documentation on how learning-to-rank works with XGBoost.

For more information, please see the tutorial. Related PRs: (#8771, #8692, #8783, #8789, #8790, #8859, #8887, #8893, #8906, #8931, #9075, #9015, #9381, #9336, #8822, #9222, #8984, #8785, #8786, #8768)

Automatically estimated intercept

In the previous version, base_score was a constant that could be set as a training parameter. In the new version, XGBoost can automatically estimate this parameter based on input labels for optimal accuracy. (#8539, #8498, #8272, #8793, #8607)

... (truncated)

Commits

• a408254 Use sys.base_prefix instead of sys.prefix (#9711)
• 22e891d [jvm-packages] Remove hard dependency on libjvm (#9698) (#9705)
• 89530c8 [CI] Build libxgboost4j.dylib for Intel Mac (#9704)
• 946ab53 Fix libpath logic for Windows (#9687)
• afd03a6 Fix build for AppleClang 11 (#9684)
• f7da938 [backport][pyspark] Support stage-level scheduling (#9519) (#9686)
• 6ab6577 Fix build for GCC 8.x (#9670)
• 8c57558 [backport] [CI] Pull CentOS 7 images from NGC (#9666) (#9668)
• 58aa98a Bump version to 2.0.1. (#9660)
• 92273b3 [backport] Add support for cgroupv2. (#9651) (#9656)
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[codecov-commenter]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 75.14%. Comparing base (2b19951) to head (fcff84e).
Report is 94 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main      #11      +/-   ##
==========================================
- Coverage   75.18%   75.14%   -0.04%     
==========================================
  Files          56       56              
  Lines        3050     3050              
==========================================
- Hits         2293     2292       -1     
- Misses        757      758       +1     

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[janheinrichmerker]

@dependabot rebase

[dependabot]

Looks like this PR has been edited by someone other than Dependabot. That means Dependabot can't rebase it - sorry!

If you're happy for Dependabot to recreate it from scratch, overwriting any edits, you can request @dependabot recreate.

[janheinrichmerker]

@dependabot recreate

[dependabot]

Looks like xgboost is no longer updatable, so this is no longer needed.