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Extend tests #104

Merged
merged 45 commits into from
Nov 22, 2017
Merged

Extend tests #104

merged 45 commits into from
Nov 22, 2017

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widdowquinn
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Improve unit test coverage.

@widdowquinn
consolidate command-line ANIm tests into test_anim.py
0bd457b
@widdowquinn
update tests for anim.py module
035e336
@widdowquinn
sort dataframe by index in ANIm module test
f203cd3
@widdowquinn
force sorting of dataframes for ANIm tests
2e1ff9e
@widdowquinn
refactor ANIm module tests
ce025a8
@widdowquinn
add tests for BLAST db creation commands
f70e0c6
@widdowquinn
add test for db format command list generation
b0de7f2
@widdowquinn
add tests for BLASTN+ and legacy BLASTN command-lines
0db55e8
@widdowquinn
add tests for ANIb/ANIblastall FASTA file fragmentation
7a09fe4
@widdowquinn
add tests of BLAST+/BLASTall output parsing
73f3f08
@widdowquinn
add test of BLAST output directory parsing
a1dffb0
@widdowquinn
remove unneeded test files (dataframes)
f0ec4e3
@widdowquinn
update file header and docstring
013ba17
@widdowquinn
exclude intermediate files from repo
4608ce1
@widdowquinn
make temporary change to Travis-CI config
84edaae
@widdowquinn
revert temporary Travis-CI config change
b6613d7
@widdowquinn
make minor format change
d3807d1
@widdowquinn
add tests of ANIb job graph construction
2b25550
@widdowquinn
sort test outputs for Python3.5 tests
75e9d54
@widdowquinn
make pep8 compliance change
472f798
@widdowquinn
add tests for pyani_jobs.py
88d190f
@widdowquinn
force sort of argument order in JobGroup for Python3.5 testing
51307bd
@widdowquinn
force pyani_jobs key ordering for Python3.5 tests
ec08090
@widdowquinn
add tests for TETRA method
767b1de
@widdowquinn
update test module headers for multiprocessing
0188e24
@widdowquinn
remove unused variable from test
0bd7339
@widdowquinn
add tests for multiprocessing
2e4aa92
@widdowquinn
modify concordance test
bab855b
@widdowquinn
reinstate concordance test on Travis-CI
9d08b0e
@widdowquinn
add pip requirements file for modules used in testing
a39bec4
@widdowquinn
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Merging new tests into master.

@widdowquinn widdowquinn reopened this Nov 22, 2017
@widdowquinn widdowquinn merged commit 24738ec into master Nov 22, 2017
@widdowquinn widdowquinn deleted the extend_tests branch November 22, 2017 21:30
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@widdowquinn