Wave-Transformer/CNN

models

msCNN and waveTransformer

experiments

*Configurations

*ClonalAE with waveTransformer

*ClonalAE with waveCNN

*TCGA Classification with waveCNN

notebook

To visualize the attention maps and features from different resolutions:

1. run experiments/ClonalAE/run_attentive_autoencoders.py to get saved outputs.
2. run experiments/ClonalAE/notebook/attention_notebook.ipynb.

slides

https://docs.google.com/presentation/d/1_lMFyUzrKEEgvJS_wORm3tFPWSKnycfEBGduk6NW6hk/edit#slide=id.g220625a933e_0_0