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BF: NETCDFPAR "Error" in build log when option not used #1651
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TYPE: bug fix KEYWORDS: netcdfpar, Error SOURCE: internal DESCRIPTION OF CHANGES: Problem: With PR wrf-model#1552 "Parallel netcdf-4 IO option" (SHA1 3cd4713), when then code was built without the new parallel NetCDF4 compression, the build log had an `Error`. The problem was related to constructing the object files in the io_netcdfpar directory. When the option is not selected at compile time, then we do not care about errors in the directory that will never be used. Solution: If the NETCDFPAR option is not selected at compile time, then do SKIP going into the io_netcdfpar directory all together. LIST OF MODIFIED FILES: m Makefile m arch/Config.pl m arch/configure.defaults TESTS CONDUCTED: 1. Without the NETCDFPAR parameter set, the build for the io_netcdfpar directory is bypassed: ``` cd ../io_netcdfpar ; \ echo SKIPPING make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.7.3/gnu/9.1.0" \ cd ../io_netcdfpar ; \ echo SKIPPING make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.7.3/gnu/9.1.0" \ ``` 2. When the NETCDFPAR env variable is set, the build includes the io_netcdfpar directory: cd ../io_netcdfpar ; \ make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.8.0/gnu/9.1.0" \ cd ../io_netcdfpar ; \ make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.8.0/gnu/9.1.0" \ ``` 3. Jenkins tests are all PASS. RELEASE NOTE: Include a stand-alone message suitable for the inclusion in the minor and annual releases. A publication citation is appropriate.
When the NETCDFPAR option was not selected, there is no need to know the version number for NetCDF. The version was never assigned, and a later echo of the version was blank. This is now rectified. ``` NetCDF version: 4.7.3 Enabled NetCDF-4/HDF-5: yes NetCDF built with PnetCDF: no ``` M configure
@weiwangncar @kkeene44 @smileMchen |
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weiwangncar
approved these changes
Jan 23, 2022
kkeene44
approved these changes
Jan 24, 2022
vlakshmanan-scala
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Apr 4, 2024
TYPE: bug fix KEYWORDS: netcdfpar, Error SOURCE: internal DESCRIPTION OF CHANGES: IMPORTANT: Without these mods, every commit since the parallel netcdf4 IO mods will fail the DA build test in the regression test. For example, at least these commits: ``` fed10f4 Adding the WRF-Solar EPS model (wrf-model#1547) 0bda5e0 Fix 4dvar build failure after commit 8b5bfe5 (wrf-model#1652) 8b5bfe5 Thompson AA enhancements: BC aerosol, biomass burning emissions, and … (wrf-model#1616) 9dc68ca After testing with UFS/GFS/FV-3, some tuning knob changes to Thompson-MP and icloud3 (cloud fraction) scheme (wrf-model#1626) 96fd889 Update HONO, TERP, and CO2 emissions (wrf-model#1644) 64fb190 SFCLAY=1, add shallow water roughness calculation (wrf-model#1543) 609c2fc New module firebrand_spotting for WRF-Fire (wrf-model#1540) 75bfe6d MYNN PBL clouds in photolysis option 4 (TUV) (wrf-model#1622) f8c4b13 Fix runtime error when using sf_surface_mosaic = 1 with use_wudapt_lcz = 0 (wrf-model#1638) b511c70 Run-time option for climate GHG for radiation (wrf-model#1625) 8194c66 Bug fix for configuration option INTEL:HSW/BDW (wrf-model#1645) 16c9287 bug fixes for radar_rf_opt=2 (wrf-model#1642) a82ce24 Sync with NoahMP Github version with all NoahMP updates since v4.3 (wrf-model#1641) 7b642cc Bug fix for TAMDAR T VarBC (wrf-model#1632) 92fd706 fix WRFDA build for Parallel netcdf-4 IO (wrf-model#1634) ``` Problem: With PR wrf-model#1552 "Parallel netcdf-4 IO option" (SHA1 3cd4713), when then code was built without the new parallel NetCDF4 compression, the build log had an `Error`. ``` > grep Error compile.log Fatal Error: Cannot open module file ‘wrf_data_ncpar.mod’ for reading at (1): No such file or directory make[2]: [diffwrf] Error 1 (ignored) make[2]: [diffwrf] Error 1 (ignored) wrf_io.f:117: Error: Can't open included file 'mpif.h' make[2]: [wrf_io.o] Error 1 (ignored) Fatal Error: Cannot open module file ‘wrf_data_ncpar.mod’ for reading at (1): No such file or directory make[2]: [field_routines.o] Error 1 (ignored) make[2]: [libwrfio_nfpar.a] Error 127 (ignored) make[2]: [libwrfio_nfpar.a] Error 1 (ignored) ``` The problem was related to constructing the object files in the io_netcdfpar directory. When the option is not selected at compile time, then we do not care about errors in the directory that will never be used. Solution: If the NETCDFPAR option is not selected at compile time, then SKIP going into the io_netcdfpar directory all together. LIST OF MODIFIED FILES: m Makefile m arch/Config.pl m arch/configure.defaults m configure TESTS CONDUCTED: 1. Without the NETCDFPAR parameter set, the build for the io_netcdfpar directory is bypassed: ``` cd ../io_netcdfpar ; \ echo SKIPPING make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.7.3/gnu/9.1.0" \ cd ../io_netcdfpar ; \ echo SKIPPING make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.7.3/gnu/9.1.0" \ ``` 2. When the NETCDFPAR env variable is set, the build includes the io_netcdfpar directory: cd ../io_netcdfpar ; \ make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.8.0/gnu/9.1.0" \ cd ../io_netcdfpar ; \ make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.8.0/gnu/9.1.0" \ ``` 3. Jenkins tests are all PASS.
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TYPE: bug fix
KEYWORDS: netcdfpar, Error
SOURCE: internal
DESCRIPTION OF CHANGES:
Problem:
With PR #1552 "Parallel netcdf-4 IO option" (SHA1 3cd4713), when then code was built without
the new parallel NetCDF4 compression, the build log had an
Error
.The problem was related to constructing the object files in the io_netcdfpar directory. When the
option is not selected at compile time, then we do not care about errors in the directory that will
never be used.
Solution:
If the NETCDFPAR option is not selected at compile time, then SKIP going into the io_netcdfpar
directory all together.
LIST OF MODIFIED FILES:
m Makefile
m arch/Config.pl
m arch/configure.defaults
m configure
TESTS CONDUCTED:
When the NETCDFPAR env variable is set, the build includes the io_netcdfpar directory:
cd ../io_netcdfpar ;
make -i -r NETCDFPARPATH="/glade/u/apps/ch/opt/netcdf/4.8.0/gnu/9.1.0" \