Compression options and stack nicknames #38
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Stack url can now be specified (if defined in the environment!) using nicknames, such as staging or production. To define the nicknames in environment add an environment variable with a prefix XCHEMALIGN_FRAGALYSIS_URL_, the script will use this to find the urls. For example the variable XCHEMALIGN_FRAGALYSIS_URL_PRODUCTION=https://fragalysis.diamond.ac.uk will set nickname 'production' to point to an url https://fragalysis.diamond.ac.uk (i.e. everything after the prefix in lowercase will become the nickname) Another feature is the compression. The scipt will now handle the data compression itself (the default) and will use an existing tarball only if instructed.
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Stack URL can now be specified (if defined in the environment!) using nicknames, such as staging or production. To define the nicknames in the environment add an environment variable with the prefix
XCHEMALIGN_FRAGALYSIS_URL_, the script will use this to find the URLs. For example, the variableXCHEMALIGN_FRAGALYSIS_URL_PRODUCTION=https://fragalysis.diamond.ac.ukwill set the nicknameproductionto point to an URLhttps://fragalysis.diamond.ac.uk(i.e. everything after the prefix in lowercase will become the nickname)Another feature is the compression. The script will now handle the data compression (the default) and use an existing tarball only if instructed.