opium_poppy_isoseq

Processed isoforms are located under data.

The GeneBank assembly accession of opium poppy reference genome used in this reasearch is GCA_003573695.1

bamToBed and bedtools are needed.

pyfaidx and pandas are needed.

Name		Name	Last commit message	Last commit date
Latest commit History 21 Commits
data		data
ttlib		ttlib
.gitattributes		.gitattributes
README.md		README.md
getUse.py		getUse.py
misMergedGeneDetect.py		misMergedGeneDetect.py
misSplitGeneDetect.py		misSplitGeneDetect.py
misSplitGeneFilter.py		misSplitGeneFilter.py
psiCalculate.py		psiCalculate.py
rectifyGtfGene.py		rectifyGtfGene.py