LongQC-1.2.1

• Fix issues in Makefile for minimap2-coverage for arm CPUs such as Apple M1 silicon (#63)
• Update contact in summary file

LongQC-1.2.0c

• Fix an issue for table parsing using Pandas (#25)
• Revise the Dockerfile for python version incompatibility and better usability (#22, #29)
• Fix an issue for flanking region plots happened if adapter length is quite long (~90 bp)

LongQC-1.2.0b

• Fix a bug in format checking for compressed Bam files (#19)
• Change treatment for minimap2 table parsing (#23, #24)
• Fix some minor points (logger in the adapt module and Makefile for mac)

LongQC-1.2.0

1.2.0 (December 2020)

• Add a new profile for PacBio HiFi dataset (-x pb-hifi)
• Change dependency from anaconda to miniconda in the Dockerfile
• Change dependency for python packages (#4, #5)
  • pandas'>=0.24.0'
  • matplotlib'>=2.1.2'
• Fix treatment for zero or very low-coverage case (#11)
• Fix large memory allocation issue in minimap2-mod codes when using multiple threads
• Add a tentative fix for process number. Now minimum number for process is 4 (--p 4) (#3)

LongQC-1.0

This is the first public release of LongQC, a QC tool for long-read datasets.