Merge branch 'OSGeo:main' into main

.flake8

@@ -24,31 +24,10 @@ per-file-ignores =
     imagery/i.atcorr/create_iwave.py: F632, F821, W293
     doc/python/m.distance.py: E501
     doc/gui/wxpython/example/dialogs.py: F401
-    locale/grass_po_stats.py: E122, E128, E231, E401, E722
     gui/scripts/d.wms.py: E501
-    gui/wxpython/core/gconsole.py: E722
-    gui/wxpython/core/render.py: E722
-    gui/wxpython/core/settings.py: E722
-    gui/wxpython/core/toolboxes.py: E722
-    gui/wxpython/core/utils.py: E722
-    gui/wxpython/core/workspace.py: E722
-    gui/wxpython/datacatalog/tree.py: E731, E402
-    gui/wxpython/dbmgr/base.py: E722
-    gui/wxpython/dbmgr/dialogs.py: E722
-    gui/wxpython/dbmgr/sqlbuilder.py: E722
-    gui/wxpython/dbmgr/manager.py: E722
-    gui/wxpython/docs/wxgui_sphinx/conf.py: E402, W291
-    gui/wxpython/gcp/manager.py: E722
-    gui/wxpython/gui_core/*: E266, E722
-    gui/wxpython/gui_core/dialogs.py: E722
-    gui/wxpython/gui_core/forms.py: E722
-    gui/wxpython/gui_core/ghelp.py: E722
-    gui/wxpython/gui_core/gselect.py: E266, E722
-    gui/wxpython/gui_core/preferences.py: E266
-    gui/wxpython/gui_core/widgets.py: E722, E266
-    gui/wxpython/image2target/*: F841, E722, E265
-    gui/wxpython/image2target/g.gui.image2target.py: E501, E265, F841
-    gui/wxpython/iscatt/*: F841, E722, F405, F403
+    gui/wxpython/image2target/*: F841, E722
+    gui/wxpython/image2target/g.gui.image2target.py: E501, F841
+    gui/wxpython/iscatt/*: F841
     gui/wxpython/lmgr/frame.py: F841, E722
     # layertree still includes some formatting issues (it is ignored by Black)
     gui/wxpython/lmgr/layertree.py: E722, E266, W504, E225

.github/workflows/additional_checks.yml

@@ -24,7 +24,7 @@ jobs:
 
     steps:
       - name: Checkout repository contents
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           fetch-depth: 31
 

.github/workflows/clang-format-check.yml

@@ -16,7 +16,7 @@ jobs:
     name: Formatting Check
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           persist-credentials: false
       - uses: DoozyX/clang-format-lint-action@c71d0bf4e21876ebec3e5647491186f8797fde31 # v0.18.2

.github/workflows/codeql-analysis.yml

@@ -40,7 +40,7 @@ jobs:
 
     steps:
       - name: Checkout repository
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
       - name: Set up Python
         uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
         with:
@@ -52,11 +52,11 @@ jobs:
           sudo apt-get install -y wget git gawk findutils
           xargs -a <(awk '! /^ *(#|$)/' ".github/workflows/apt.txt") -r -- \
               sudo apt-get install -y --no-install-recommends --no-install-suggests
-      - uses: rui314/setup-mold@0bf4f07ef9048ec62a45f9dbf2f098afa49695f0 # v1
+      - uses: rui314/setup-mold@c49f92ee787f4e2bba3330d01755ef8c7221699a # v1
         if: ${{ matrix.language == 'c-cpp' }}
 
       - name: Initialize CodeQL
-        uses: github/codeql-action/init@294a9d92911152fe08befb9ec03e240add280cb3 # v3.26.8
+        uses: github/codeql-action/init@e2b3eafc8d227b0241d48be5f425d47c2d750a13 # v3.26.10
         with:
           languages: ${{ matrix.language }}
           config-file: ./.github/codeql/codeql-config.yml
@@ -81,6 +81,6 @@ jobs:
         run: .github/workflows/build_ubuntu-22.04.sh "${HOME}/install"
 
       - name: Perform CodeQL Analysis
-        uses: github/codeql-action/analyze@294a9d92911152fe08befb9ec03e240add280cb3 # v3.26.8
+        uses: github/codeql-action/analyze@e2b3eafc8d227b0241d48be5f425d47c2d750a13 # v3.26.10
         with:
           category: "/language:${{matrix.language}}"

.github/workflows/coverity.yml

@@ -17,7 +17,7 @@ jobs:
     runs-on: ubuntu-22.04
     if: github.repository == 'OSGeo/grass'
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
 
       - name: Get dependencies
         run: |

.github/workflows/create_release_draft.yml

@@ -30,7 +30,7 @@ jobs:
       contents: write
     steps:
       - name: Checks-out repository
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           ref: ${{ github.ref }}
           fetch-depth: 0

.github/workflows/docker.yml

@@ -49,7 +49,7 @@ jobs:
 
     steps:
       - name: Checkout
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           fetch-depth: 0
       - name: Docker meta
@@ -68,15 +68,15 @@ jobs:
       - name: Set up QEMU
         uses: docker/setup-qemu-action@49b3bc8e6bdd4a60e6116a5414239cba5943d3cf # v3.2.0
       - name: Set up Docker Buildx
-        uses: docker/setup-buildx-action@988b5a0280414f521da01fcc63a27aeeb4b104db # v3.6.1
+        uses: docker/setup-buildx-action@8026d2bc3645ea78b0d2544766a1225eb5691f89 # v3.7.0
       - name: Login to DockerHub
         uses: docker/login-action@9780b0c442fbb1117ed29e0efdff1e18412f7567 # v3.3.0
         with:
           username: ${{ secrets.DOCKERHUB_USERNAME }}
           password: ${{ secrets.DOCKERHUB_TOKEN  }}
       - name: Build and push
         id: docker_build
-        uses: docker/build-push-action@5cd11c3a4ced054e52742c5fd54dca954e0edd85 # v6.7.0
+        uses: docker/build-push-action@4f58ea79222b3b9dc2c8bbdd6debcef730109a75 # v6.9.0
         with:
           push: true
           pull: true

.github/workflows/gcc.yml

@@ -26,7 +26,7 @@ jobs:
       fail-fast: false
 
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
       - name: Get dependencies
         run: |
           sudo apt-get update -y

.github/workflows/macos.yml

@@ -44,13 +44,13 @@ jobs:
             -mindepth 1 -maxdepth 1 -type f -print -delete
           # Rehash to forget about the deleted files
           hash -r
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
       - name: Get current date cache key segment
         id: date
         # Year and week of year so cache key changes weekly
         run: echo "date=$(date +%Y-%U)" >> "${GITHUB_OUTPUT}"
       - name: Setup Mamba
-        uses: mamba-org/setup-micromamba@f8b8a1e23a26f60a44c853292711bacfd3eac822 # v1.9.0
+        uses: mamba-org/setup-micromamba@59b11321ffd9186cd5165633a02c5bba47de6d13 # v1.10.0
         with:
           init-shell: bash
           environment-file: .github/workflows/macos_dependencies.txt

.github/workflows/osgeo4w.yml

@@ -31,7 +31,7 @@ jobs:
         run: |
           git config --global core.autocrlf false
           git config --global core.eol lf
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
       - uses: msys2/setup-msys2@ddf331adaebd714795f1042345e6ca57bd66cea8 # v2.24.1
         with:
           path-type: inherit
@@ -66,9 +66,13 @@ jobs:
             pdal-devel
             pdcurses
             proj-devel
+            python3-core
+            python3-jupyter
             python3-matplotlib
             python3-numpy
+            python3-pip
             python3-ply
+            python3-pytest
             python3-pywin32
             python3-wxpython
             regex-devel
@@ -98,6 +102,19 @@ jobs:
         shell: msys2 {0}
         run: .github/workflows/test_simple.sh
 
+      - name: Install pytest plugins
+        run: python -m pip install pytest-timeout
+        shell: cmd /D /E:ON /V:OFF /S /C "CALL C:/OSGeo4W/OSGeo4W.bat "{0}""
+      - name: Run pytest with a single worker
+        run: |
+          call %OSGEO4W_ROOT%\opt\grass\etc\env.bat
+          set PYTHONPATH=%GISBASE%\etc\python;%PYTHONPATH%
+          path %GISBASE%\lib;%GISBASE%\bin;%PATH%
+          pytest --verbose --color=yes ^
+            --durations=0 --durations-min=0.5 ^
+            -ra .
+        shell: cmd /D /E:ON /V:OFF /S /C "CALL C:/OSGeo4W/OSGeo4W.bat "{0}""
+
       - name: Run tests
         run: .github/workflows/test_thorough.bat 'C:\OSGeo4W\opt\grass\grass85.bat' 'C:\OSGeo4W\bin\python3'
 

.github/workflows/osgeo4w_gunittest.cfg

@@ -0,0 +1,32 @@
+[gunittest]
+
+# Files (or wildcard patterns) to exclude from testing separated by newline or
+# space. This would be ideally empty or it would include just special cases,
+# but it includes mainly tests which can (and should) be fixed.
+exclude =
+    gui/wxpython/core/testsuite/toolboxes.sh
+    lib/init/testsuite/test_grass_tmp_mapset.py
+    python/grass/gunittest/testsuite/test_gunitest_doctests.py
+    python/grass/pygrass/raster/testsuite/test_pygrass_raster_doctests.py
+    python/grass/pygrass/rpc/testsuite/test_pygrass_rpc_doctests.py
+    python/grass/script/testsuite/test_script_doctests.py
+    python/grass/temporal/testsuite/unittests_temporal_raster_conditionals_complement_else.py
+    temporal/t.info/testsuite/test.t.info.sh
+    temporal/t.rast.accdetect/testsuite/test.t.rast.accdetect.reverse.sh
+    temporal/t.rast.accdetect/testsuite/test.t.rast.accdetect.sh
+    temporal/t.rast.aggregate/testsuite/test_aggregation_relative.py
+    vector/v.edit/testsuite/select_all_flag.sh
+    vector/v.in.lidar/testsuite/decimation_test.py
+    vector/v.in.lidar/testsuite/mask_test.py
+    vector/v.in.lidar/testsuite/test_v_in_lidar_basic.py
+    vector/v.in.lidar/testsuite/test_v_in_lidar_filter.py
+    vector/v.what.rast3/testsuite/test.v.what.rast3.sh
+    vector/v.what/testsuite/test_vwhat_layers.py
+    vector/v.what/testsuite/test_vwhat_ncspm.py
+
+# Maximum time for execution of one test file (not a test function)
+# after which test is terminated (which may not terminate child processes
+# from that test).
+# Using 5 minutes as maximum (average test time should be much shorter,
+# couple seconds per file, median should be around one second).
+timeout = 300

.github/workflows/periodic_update.yml

@@ -21,7 +21,7 @@ jobs:
       - name: Create URL to the run output
         id: vars
         run: echo "run-url=https://github.com/$GITHUB_REPOSITORY/actions/runs/$GITHUB_RUN_ID" >> $GITHUB_OUTPUT
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
       - name: "Check that autoconf scripts are up-to-date:"
         run: |
           rm -f config.guess config.sub

.github/workflows/pytest.yml

@@ -32,7 +32,7 @@ jobs:
       PYTHONWARNINGS: always
 
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
 
       - name: Set up Python
         uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
@@ -48,7 +48,7 @@ jobs:
           xargs -a <(awk '! /^ *(#|$)/' ".github/workflows/apt.txt") -r -- \
               sudo apt-get install -y --no-install-recommends --no-install-suggests
 
-      - uses: rui314/setup-mold@0bf4f07ef9048ec62a45f9dbf2f098afa49695f0 # v1
+      - uses: rui314/setup-mold@c49f92ee787f4e2bba3330d01755ef8c7221699a # v1
 
       - name: Install Python dependencies
         run: |
@@ -108,7 +108,7 @@ jobs:
           coverage html
 
       - name: Upload coverage reports to Codecov
-        uses: codecov/codecov-action@e28ff129e5465c2c0dcc6f003fc735cb6ae0c673 # v4.5.0
+        uses: codecov/codecov-action@b9fd7d16f6d7d1b5d2bec1a2887e65ceed900238 # v4.6.0
         with:
           verbose: true
           flags: pytest-python-${{ matrix.python-version }}

.github/workflows/python-code-quality.yml

@@ -34,9 +34,9 @@ jobs:
       # renovate: datasource=pypi depName=pylint
       PYLINT_VERSION: "2.12.2"
       # renovate: datasource=pypi depName=bandit
-      BANDIT_VERSION: "1.7.9"
+      BANDIT_VERSION: "1.7.10"
       # renovate: datasource=pypi depName=ruff
-      RUFF_VERSION: "0.6.7"
+      RUFF_VERSION: "0.6.8"
 
     runs-on: ${{ matrix.os }}
     permissions:
@@ -54,7 +54,7 @@ jobs:
           echo Bandit: ${{ env.BANDIT_VERSION }}
           echo Ruff: ${{ env.RUFF_VERSION }}
 
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
 
       - name: Set up Python
         uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
@@ -135,7 +135,7 @@ jobs:
           path: bandit.sarif
 
       - name: Upload SARIF File into Security Tab
-        uses: github/codeql-action/upload-sarif@294a9d92911152fe08befb9ec03e240add280cb3 # v3.26.8
+        uses: github/codeql-action/upload-sarif@e2b3eafc8d227b0241d48be5f425d47c2d750a13 # v3.26.10
         with:
           sarif_file: bandit.sarif
 
@@ -147,7 +147,7 @@ jobs:
         run: |
           echo "MAKEFLAGS=-j$(nproc)" >> $GITHUB_ENV
 
-      - uses: rui314/setup-mold@0bf4f07ef9048ec62a45f9dbf2f098afa49695f0 # v1
+      - uses: rui314/setup-mold@c49f92ee787f4e2bba3330d01755ef8c7221699a # v1
       - name: Build
         run: .github/workflows/build_${{ matrix.os }}.sh $HOME/install
 

.github/workflows/super-linter.yml

@@ -25,7 +25,7 @@ jobs:
       statuses: write
 
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
         with:
           # super-linter needs the full git history to get the
           # list of files that changed across commits

.github/workflows/test-nix.yml

@@ -28,7 +28,7 @@ jobs:
       contents: read
 
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
 
       - name: Install nix
         uses: DeterminateSystems/nix-installer-action@da36cb69b1c3247ad7a1f931ebfd954a1105ef14 # v14

.github/workflows/test_thorough.bat

@@ -2,4 +2,4 @@ set grass=%1
 set python=%2
 
 call %grass% --tmp-project XY --exec g.download.project url=https://grass.osgeo.org/sampledata/north_carolina/nc_spm_full_v2alpha2.tar.gz path=%USERPROFILE%
-call %grass% --tmp-project XY --exec %python% -m grass.gunittest.main --grassdata %USERPROFILE% --location nc_spm_full_v2alpha2 --location-type nc --min-success 86
+call %grass% --tmp-project XY --exec %python% -m grass.gunittest.main --grassdata %USERPROFILE% --location nc_spm_full_v2alpha2 --location-type nc --min-success 96 --config .github\workflows\osgeo4w_gunittest.cfg

.github/workflows/titles.yml

@@ -21,7 +21,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout base repository (doesn't include the PR changes)
-        uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+        uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
       - name: Call PR title validation function
         run: python utils/generate_release_notes.py check "${PR_TITLE}" "" ""
         env:

.github/workflows/ubuntu.yml

@@ -59,7 +59,7 @@ jobs:
       fail-fast: false
 
     steps:
-      - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
+      - uses: actions/checkout@d632683dd7b4114ad314bca15554477dd762a938 # v4.2.0
 
       - name: Invert inclusion list to an exclusion list
         id: get-exclude

.pre-commit-config.yaml

@@ -37,13 +37,13 @@ repos:
           )
   - repo: https://github.com/astral-sh/ruff-pre-commit
     # Ruff version.
-    rev: v0.6.7
+    rev: v0.6.8
     hooks:
       # Run the linter.
       - id: ruff
         args: [--fix, --preview]
   - repo: https://github.com/igorshubovych/markdownlint-cli
-    rev: v0.41.0
+    rev: v0.42.0
     hooks:
       - id: markdownlint-fix
   # Using this mirror lets us use mypyc-compiled black, which is about 2x faster