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Process data into input.Rdata with input.R or similar tool. The output is Rdata file that contains objects with pre-processed input data.
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Modify parameters in param.R. Use input.R:inspect_dataset() to estimate co-occurrence values.
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Run algorithm:
source('klink-2.R') # compiles C code as well
klink2('input.Rdata')
triples object will contain output semantic relations.