merge 24.1 release into main (aces#792)

* Turn off column statistics option when running mysqldump (aces#771)

* turn off column statistics option when running mysqldump

* add new option to the script to provide additional mysqldump options

* run mass perldoc

* fix perldoc

* fix perldoc

* check if date exists otherwise set it to null when inserting into the files table (aces#777)

* [dcm2bids] Get scanner candidate's RegistrationProjectID based on the scanned candidate's visit ProjectID (aces#779)

* add registrationProjectID to the function creating the candidate scanner

* missed function call in base_pipeline

* flake8

* Pull 24.0-release to 24.1-release (aces#788)

* Reload the mri_upload dictionary before checking if a tarchive has been validated (aces#783)

* reload mri_upload object

* remove debugging exit and print statements

* fix minor bugs when dealing with scans.tsv files (aces#774)

* fix regex search for excluded series description patterns (aces#786)

* fix_return_statement_of_create_imaging_upload_dict_from_upload_id_function (aces#787)

* merge 24.0 release to 24.1-release (aces#791)

* Reload the mri_upload dictionary before checking if a tarchive has been validated (aces#783)

* reload mri_upload object

* remove debugging exit and print statements

* fix minor bugs when dealing with scans.tsv files (aces#774)

* fix regex search for excluded series description patterns (aces#786)

* fix_return_statement_of_create_imaging_upload_dict_from_upload_id_function (aces#787)

* [dcm2bids] Insert into MRICandidateErrors if there is a Candidate PatientName mismatch (aces#790)

* insert into MRICandidateErrors when candidate mismatch or pname not matching between DICOMs and NIfTI

* remove exit

python/lib/imaging.py

@@ -268,7 +268,7 @@ def insert_protocol_violated_scan(self, patient_name, cand_id, psc_id, tarchive_
             "PSCID": psc_id,
             "TarchiveID": tarchive_id,
             "time_run": datetime.datetime.now().strftime('%Y-%m-%d %H:%M:%S'),
-            "series_description": scan_param["SeriesDescription"] if "SeriesDescription" in scan_param.keys() else None,
+            "series_description": scan_param["SeriesDescription"],
             "minc_location": file_rel_path,
             "PatientName": patient_name,
             "TR_range": scan_param["RepetitionTime"] if "RepetitionTime" in scan_param.keys() else None,