forked from jkhender/global-workflow
-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Update UPP and diag table for CATChem workflow
- Loading branch information
1 parent
c172c6e
commit a39f78f
Showing
17 changed files
with
404 additions
and
41 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,21 @@ | ||
| #! /usr/bin/env bash | ||
|
|
||
| source "${HOMEgfs}/ush/preamble.sh" | ||
| source "${HOMEgfs}/ush/jjob_header.sh" -e "stage_ic" -c "base stage_ic" | ||
|
|
||
| # Restart conditions for GFS cycle come from GDAS | ||
| # shellcheck disable=SC2153 | ||
| rCDUMP=${CDUMP} | ||
| [[ ${CDUMP} = "gfs" ]] && export rCDUMP="gdas" | ||
| export rCDUMP | ||
|
|
||
| # Execute the Script | ||
| "${HOMEgfs}/scripts/exglobal_stage_ic_s2s.sh" | ||
|
|
||
| ########################################## | ||
| # Remove the Temporary working directory | ||
| ########################################## | ||
| cd "${DATAROOT}" || (echo "${DATAROOT} does not exist. ABORT!"; exit 1) | ||
| [[ ${KEEPDATA} = "NO" ]] && rm -rf "${DATA}" | ||
|
|
||
| exit 0 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| #! /usr/bin/env bash | ||
|
|
||
| source "${HOMEgfs}/ush/preamble.sh" | ||
|
|
||
| # Source FV3GFS workflow modules | ||
| . "${HOMEgfs}/ush/load_fv3gfs_modules.sh" | ||
| status=$? | ||
| [[ "${status}" -ne 0 ]] && exit "${status}" | ||
|
|
||
| export job="stage_ic" | ||
| export jobid="${job}.$$" | ||
|
|
||
| # Execute the JJOB | ||
| "${HOMEgfs}/jobs/JGLOBAL_STAGE_IC_S2S" | ||
| status=$? | ||
|
|
||
|
|
||
| exit "${status}" |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1 @@ | ||
| /scratch2/BMC/gsd-fv3-dev/lzhang/UFS-dev/global-workflow/sorc/upp.fd/parm/postxconfig-NT-CCPP-CHEM-F00.txt |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1 @@ | ||
| /scratch2/BMC/gsd-fv3-dev/lzhang/UFS-dev/global-workflow/sorc/upp.fd/parm/postxconfig-NT-CCPP-CHEM.txt |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,67 @@ | ||
| # chemical tracers advected by FV3 | ||
| ### | ||
| "gfs_dyn", "so2", "so2", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "sulf", "sulf", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "DMS", "DMS", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "msa", "msa", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "pp25", "pp25", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "bc1", "bc1", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "bc2", "bc2", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "oc1", "oc1", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "oc2", "oc2", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "dust1", "dust1", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "dust2", "dust2", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "dust3", "dust3", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "dust4", "dust4", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "dust5", "dust5", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "seas1", "seas1", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "seas2", "seas2", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "seas3", "seas3", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "seas4", "seas4", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "seas5", "seas5", "fv3_history", "all", .false., "none", 2 | ||
| "gfs_dyn", "pp10", "pp10", "fv3_history", "all", .false., "none", 2 | ||
|
|
||
| # chemical diag 2D variables | ||
| "gfs_phys", "maod", "maod", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "maoddt", "maoddt", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "maodbc", "maodbc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "maodoc", "maodoc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "maodsu", "maodsu", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "maodss", "maodss", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "bcembb", "bcembb", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "bceman", "bceman", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "ocembb", "ocembb", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "oceman", "oceman", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "so2embb", "so2embb", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "so2eman", "so2eman", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "duem001", "duem001", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "duem002", "duem002", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "duem003", "duem003", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "duem004", "duem004", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "duem005", "duem005", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "ssem001", "ssem001", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "ssem002", "ssem002", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "ssem003", "ssem003", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "ssem004", "ssem004", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "ssem005", "ssem005", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "oc1wtl", "oc1wtl", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "oc2wtl", "oc2wtl", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "bc1wtl", "bc1wtl", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "bc2wtl", "bc2wtl", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "bc1wtc", "bc1wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "bc2wtc", "bc2wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "oc1wtc", "oc1wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "oc2wtc", "oc2wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "dust1wtc", "dust1wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "dust2wtc", "dust2wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "dust3wtc", "dust3wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "dust4wtc", "dust4wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "dust5wtc", "dust5wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "seas1wtc", "seas1wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "seas2wtc", "seas2wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "seas3wtc", "seas3wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "seas4wtc", "seas4wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "seas5wtc", "seas5wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "sulfwtc", "sulfwtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "pp25wtc", "pp25wtc", "fv3_history2d", "all", .false., "none", 2 | ||
| "gfs_phys", "pp10wtc", "pp10wtc", "fv3_history2d", "all", .false., "none", 2 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,101 @@ | ||
| # prognostic aerosols | ||
| "TRACER", "atmos_mod", "so2" | ||
| "longname", "so2 mixing ratio" | ||
| "units", "ppm" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "sulf" | ||
| "longname", "sulfate mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "dms" | ||
| "longname", "DMS mixing ratio" | ||
| "units", "ppm" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "msa" | ||
| "longname", "msa mixing ratio" | ||
| "units", "ppm" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "pp25" | ||
| "longname", "primary PM25 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "bc1" | ||
| "longname", "hydrophobic black carbon mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "bc2" | ||
| "longname", "hydrophillic black carbon mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "oc1" | ||
| "longname", "hydrophobic organic carbon mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "oc2" | ||
| "longname", "hydrophillic organic carbon mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "dust1" | ||
| "longname", "fine dust1 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "dust2" | ||
| "longname", "fine dust2 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "dust3" | ||
| "longname", "coarse dust3 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "dust4" | ||
| "longname", "coarse dust4 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "dust5" | ||
| "longname", "coarse dust5 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "seas1" | ||
| "longname", "seasalt1 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "seas2" | ||
| "longname", "seasalt2 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "seas3" | ||
| "longname", "seasalt3 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "seas4" | ||
| "longname", "seasalt4 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "seas5" | ||
| "longname", "seasalt5 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / | ||
| "TRACER", "atmos_mod", "pp10" | ||
| "longname", "primary PM10 mixing ratio" | ||
| "units", "ug/kg" | ||
| "tracer_usage", "chemistry" | ||
| "profile_type", "fixed", "surface_value=1.e-30" / |
Oops, something went wrong.