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I am reporting a problem with GSEApy version, Python version, and operating
system as follows:
3.10.12 | packaged by conda-forge | (main, Jun 23 2023, 22:40:32) [GCC 12.3.0]
CPython
Linux-4.14.348-265.565.amzn2.x86_64-x86_64-with-glibc2.35
1.1.3
Expected behaviour
correct dotplot label should be "proportion Genes in set"
Actual behaviour
The dotplot label currently reads ‘% Genes in set’, but the values displayed are proportions (e.g., 0.4 instead of 40%). To ensure the units match, either the legend values should be multiplied by 100 or the label should be adjusted to reflect proportions shown.”
Setup
I am reporting a problem with GSEApy version, Python version, and operating
system as follows:
3.10.12 | packaged by conda-forge | (main, Jun 23 2023, 22:40:32) [GCC 12.3.0]
CPython
Linux-4.14.348-265.565.amzn2.x86_64-x86_64-with-glibc2.35
1.1.3
Expected behaviour
correct dotplot label should be "proportion Genes in set"
Actual behaviour
The dotplot label currently reads ‘% Genes in set’, but the values displayed are proportions (e.g., 0.4 instead of 40%). To ensure the units match, either the legend values should be multiplied by 100 or the label should be adjusted to reflect proportions shown.”
Steps to reproduce
gp.dotplot(enr_up.res2d, figsize=(3,5), title="Up", cmap = plt.cm.autumn_r)
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