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Fixing entry points #10
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Whilst checking up on AFM-analysis#9 I was browsing the other issues and thought I might be Work related to AFM-analysis#6 Fixes the entry points (also known as Command Line Interface) by... * Adding `if __name__ == "__main__:"` to each of the `cll.*` submodules to instantiate and run the classes defined within. * Changes some of the dependencies (`matplotlib`) to not be conditional on installing the CLI optional dependencies. * Corrects the entry points defined in `pyproject.toml` ```bash (igor2) ❱ pip install -e . (igor2) ❱ igorbinarywave -f tests/data/mac-double.ibw 5 4 3 2 1 (igor2) ❱ igorpackedexperiment -f tests/data/polar-graphs-demo.pxp [<UnknownRecord-11 139944549273552>, <UnknownRecord-12 139944553167504>, <UnknownRecord-13 139944550564240>, <UnknownRecord-13 139944549266768>, <UnknownRecord-13 139944550696400>, <UnknownRecord-13 139944561918096>, <UnknownRecord-13 139944549482768>, <UnknownRecord-13 139944549486032>, <UnknownRecord-13 139944549484816>, <UnknownRecord-14 139944561920272>, <UnknownRecord-15 139944549492432>, <UnknownRecord-16 139944549498448>, <UnknownRecord-16 139944549491792>, <UnknownRecord-17 139944549496784>, <UnknownRecord-17 139944549498704>, <UnknownRecord-17 139944549496912>, <UnknownRecord-17 139944549497040>, <UnknownRecord-17 139944549497232>, <UnknownRecord-17 139944549497296>, <UnknownRecord-16 139944549497424>, <UnknownRecord-17 139944549497552>, <UnknownRecord-17 139944549497680>, <UnknownRecord-17 139944549497872>, <UnknownRecord-17 139944549498512>, <UnknownRecord-17 139944549532496>, <UnknownRecord-17 139944549532816>, <UnknownRecord-18 139944549532112>, <UnknownRecord-11 139944549532176>, <UnknownRecord-26 139944549531984>, <UnknownRecord-26 139944549533072>, <VariablesRecord 139944549532944>, <HistoryRecord 139944549536208>, <WaveRecord 139944549536528>, <WaveRecord 139944549361232>, <WaveRecord 139944552677264>, <WaveRecord 139944558782928>, <WaveRecord 139944551312848>, <WaveRecord 139944552724496>, <WaveRecord 139944578160784>, <WaveRecord 139944548687696>, <FolderStartRecord 139944560740304>, <FolderStartRecord 139944561017296>, <VariablesRecord 139944549535312>, <FolderEndRecord 139944549482640>, <FolderStartRecord 139944548760272>, <VariablesRecord 139944561920208>, <FolderEndRecord 139944548686224>, <FolderEndRecord 139944556294736>, <RecreationRecord 139944548890320>, <GetHistoryRecord 139944549546960>, <ProcedureRecord 139944554896400>] ``` I'm not sure if this is the expected output but the entry points work in some manner. I couldn't work out the difference between the test data files (I'm on GNU/Linux rather than OSX/Windows). However, I don't think this should be the final solution as there is still a dependency on the original `igor` as the [`Script`](https://github.com/wking/igor/blob/master/igor/script.py) module is imported and it would make more sense to have the entry points defined wholly within `igor2`.
janberges
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Mar 16, 2024
This fix has already been included in slackline's commit "Fixing entry points", see pull request AFM-analysis#10 by ns-rse.
janberges
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This fix has also been included in slackline's commit "Fixing entry points", see pull request AFM-analysis#10 by ns-rse.
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Sorry, I did not subscribe to pull requests, so this one slipped me. Will take a look this week. |
paulmueller
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Mar 20, 2024
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Sorry for the delay.
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Whilst checking up on #9 I was browsing the other issues and thought I might be able to help with #6.
This Pull Request attempts to fix the entry points (also known as Command Line Interface) by...
main()
functions which instantiate and run the classes defined within and addif __name__ == "__main__:"
to run these if the script is called..matplotlib
) to not be conditional on installing the CLI optional dependencies.pyproject.toml
to point to each of themain()
functions.I'm not sure if this is the expected output but the entry points work in some manner. I couldn't work out the difference between the test data files (I'm on GNU/Linux rather than OSX/Windows).
However, I don't think this should be the final solution as there is still a dependency on the original
igor
as theScript
module is imported and it would make more sense to have the entry points defined wholly withinigor2
.I've put place holders for testing the entry points until a decision is made on how to proceed.