Skip to content

Commit

Permalink
render
Browse files Browse the repository at this point in the history
  • Loading branch information
Aariq committed May 19, 2024
1 parent 5aca8e3 commit 5c0548f
Show file tree
Hide file tree
Showing 2 changed files with 18 additions and 1 deletion.
15 changes: 15 additions & 0 deletions _freeze/publications/execute-results/html.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,15 @@
{
"hash": "0701e88cc0973d64cb48b15da23ce954",
"result": {
"engine": "knitr",
"markdown": "---\ntitle: \"Publications\"\nformat:\n html:\n from: markdown+autolink_bare_uris\n---\n\n```{=html}\n<!--\nBecause the rendered site is frozen, an update to the source code (i.e. this document) is required to update the page. After adding a publication to Zotero and syncing, edit this comment (add a space or something), `quarto_render()`, then push to GitHub to update the website. |||||||||\n-->\n```\n\n<div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Riemer, K., Huynh, Kimberly. M., Schnaufer, C., Pistorius, J., Barrios, Jorge. E., Cain, Emily. J., Guo, J., <b>Scott, E. R.</b>, Diaz, R., &amp; LeBauer, D. S. (2024). <i>CCT Data Science Group Procedures</i>. Zenodo. https://doi.org/10.5281/zenodo.10783693</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Bruna, E. M., Uriarte, M., Darrigo, M. R., Rubim, P., Jurinitz, C. F., <b>Scott, E. R.</b>, Ferreira da Silva, O., &amp; Kress, W. J. (2023). Demography of the understory herb Heliconia acuminata (Heliconiaceae) in an experimentally fragmented tropical landscape. <i>Ecology</i>, <i>104</i>(12), e4174. https://doi.org/10.1002/ecy.4174</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Richardson, K. M., Jospe, M. R., Saleh, A. A., Clarke, T. N., Bedoya, A. R., Behrens, N., Marano, K., Cigan, L., Liao, Y., <b>Scott, E. R.</b>, Guo, J. S., Aguinaga, A., &amp; Schembre, S. M. (2023). Use of Biological Feedback as a Health Behavior Change Technique in Adults: Scoping Review. <i>Journal of Medical Internet Research</i>, <i>25</i>(1), e44359. https://doi.org/10.2196/44359</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Jackson, E. D., Casolaro, C., Nebeker, R. S., <b>Scott, E. R.</b>, Dukes, J. S., Griffin, T. S., &amp; Orians, C. M. (2023). Current and legacy effects of precipitation treatments on growth and nutrition in contrasting crops. <i>Agriculture, Ecosystems &amp; Environment</i>, <i>352</i>, 108513. https://doi.org/10.1016/j.agee.2023.108513</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Braga, P. H. P., H&#xE9;bert, K., Hudgins, E. J., <b>Scott, E. R.</b>, Edwards, B. P. M., S&#xE1;nchez Reyes, L. L., Grainger, M. J., Foroughirad, V., Hillemann, F., Binley, A. D., Brookson, C. B., Gaynor, K. M., Shafiei Sabet, S., G&#xFC;ncan, A., Weierbach, H., Gomes, D. G. E., &amp; Crystal-Ornelas, R. (2023). Not just for programmers: How GitHub can accelerate collaborative and reproducible research in ecology and evolution. <i>Methods in Ecology and Evolution</i>, <i>n/a</i>(n/a). https://doi.org/10.1111/2041-210X.14108</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, Uriarte, M., &amp; Bruna, E. M. (2022). Delayed effects of climate on vital rates lead to demographic divergence in Amazonian forest fragments. <i>Global Change Biology</i>, <i>28</i>(2), 463&#x2013;479. https://doi.org/10.1111/gcb.15900</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Donatelli, C. M., Roberts, A. S., Scott, E., DeSmith, K., Summers, D., Abu-Bader, L., Baxter, D., Standen, E. M., Porter, M. E., Summers, A. P., &amp; Tytell, E. D. (2021). Foretelling the flex&#x2014;vertebral shape predicts behavior and ecology of fishes. <i>Integrative and Comparative Biology</i>, <i>61</i>(2), 414&#x2013;426. https://doi.org/10.1093/icb/icab110</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, &amp; Crone, E. E. (2021). Using the right tool for the job: the difference between unsupervised and supervised analyses of multivariate ecological data. <i>Oecologia</i>, <i>196</i>, 13&#x2013;25. https://doi.org/10.1007/s00442-020-04848-w</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, Wei, J.-P., Li, X., Han, W.-Y., &amp; Orians, C. M. (2021). Differing non-linear, lagged effects of temperature and precipitation on an insect herbivore and its host plant. <i>Ecological Entomology</i>, <i>46</i>(4), 866&#x2013;876. https://doi.org/10.1111/een.13023</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, Li, X., Wei, J.-P., Kfoury, N., Morimoto, J., Guo, M.-M., Agyei, A., Robbat, A., Ahmed, S., Cash, S. B., Griffin, T. S., Stepp, J. R., Han, W., &amp; Orians, C. M. (2020). Changes in tea plant secondary metabolite profiles as a function of leafhopper density and damage. <i>Frontiers in Plant Science</i>, <i>11</i>, 636. https://doi.org/10.3389/FPLS.2020.00636</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Sz&#xF6;cs, E., Stirling, T., <b>Scott, E. R.</b>, Scharm&#xFC;ller, A., &amp; Sch&#xE4;fer, R. B. (2020). webchem: An R Package to Retrieve Chemical Information from the Web. <i>Journal of Statistical Software</i>, <i>93</i>(13), 1&#x2013;17. https://doi.org/10.18637/jss.v093.i13</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Kfoury, N., <b>Scott, E. R.</b>, Orians, C. M., Ahmed, S., Cash, S. B., Griffin, T., Matyas, C., Stepp, J. R., Han, W., Xue, D., Long, C., &amp; Robbat, A. (2019). Plant-Climate Interaction Effects: Changes in the Relative Distribution and Concentration of the Volatile Tea Leaf Metabolome in 2014&#x2013;2016. <i>Frontiers in Plant Science</i>, <i>10</i>, 1518. https://doi.org/10.3389/fpls.2019.01518</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Orians, C. M., Schweiger, R., Dukes, J. S., <b>Scott, E. R.</b>, &amp; M&#xFC;ller, C. (2019). Combined impacts of prolonged drought and warming on plant size and foliar chemistry. <i>Annals of Botany</i>, <i>124</i>(1), 41&#x2013;52. https://doi.org/10.1093/aob/mcz004</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, Li, X., Kfoury, N., Morimoto, J., Han, W.-Y., Ahmed, S., Cash, S. B., Griffin, T. S., Stepp, J. R., Robbat, A., &amp; Orians, C. M. (2019). Interactive effects of drought severity and simulated herbivory on tea (Camellia sinensis) volatile and non-volatile metabolites. <i>Environmental and Experimental Botany</i>, <i>157</i>, 283&#x2013;292. https://doi.org/10.1016/j.envexpbot.2018.10.025</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Kfoury, N., Morimoto, J., Kern, A., <b>Scott, E. R.</b>, Orians, C. M., Ahmed, S., Griffin, T., Cash, S. B., Stepp, J. R., Xue, D., Long, C., &amp; Robbat, A. (2018). Striking changes in tea metabolites due to elevational effects. <i>Food Chemistry</i>, <i>264</i>, 334&#x2013;341. https://doi.org/10.1016/j.foodchem.2018.05.040</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Li, X., Wei, J.-P., <b>Scott, E. R.</b>, Liu, J.-W. J.-W., Guo, S., Li, Y., Zhang, L., &amp; Han, W.-Y. (2018). Exogenous Melatonin Alleviates Cold Stress by Promoting Antioxidant Defense and Redox Homeostasis in Camellia sinensis L. <i>Molecules</i>, <i>23</i>(1), 165. https://doi.org/10.3390/molecules23010165</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, &amp; Orians, C. M. (2018). Differential Changes in Tea Quality as Influenced by Insect Herbivory. In W.-Y. Han, X. Li, &amp; G. J. Ahammed (Eds.), <i>Stress Physiology of Tea in the Face of Climate Change</i> (pp. 217&#x2013;240). Springer Singapore. https://doi.org/10.1007/978-981-13-2140-5_10</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Kfoury, N., <b>Scott, E. R.</b>, Orians, C., &amp; Robbat, A. (2017). Direct Contact Sorptive Extraction: A Robust Method for Sampling Plant Volatiles in the Field. <i>Journal of Agricultural and Food Chemistry</i>, <i>65</i>(38), 8501&#x2013;8509. https://doi.org/10.1021/acs.jafc.7b02847</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Dorchin, N., <b>Scott, E. R.</b>, Clarkin, C. E., Luongo, M. P., Jordan, S., &amp; Abrahamson, W. G. (2009). Behavioural, ecological and genetic evidence confirm the occurrence of host-associated differentiation in goldenrod gall-midges. <i>Journal of Evolutionary Biology</i>, <i>22</i>(4), 729&#x2013;739. https://doi.org/10.1111/j.1420-9101.2009.01696.x</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Dorchin, N., Clarkin, C. E., <b>Scott, E. R.</b>, Luongo, M. P., &amp; Abrahamson, W. G. (2007). Taxonomy, life history, and population sex ratios of North American Dasineura (Diptera&#x202F;: Cecidomyiidae) on goldenrods (Asteraceae). <i>Annals of the Entomological Society of America</i>, <i>100</i>(4), 539&#x2013;548. https://doi.org/10.1603/0013-8746(2007)100[539:TLHAPS]2.0.CO;2</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Dorchin, N., <b>Scott, E. R.</b>, &amp; Abrahamson, W. G. (2006). First record of Macrolabis (Diptera&#x202F;: Cecidomyiidae) in America: A new inquiline species from Dasineura folliculi galls on goldenrods. <i>Annals of the Entomological Society of America</i>, <i>99</i>(4), 656&#x2013;661. https://doi.org/10.1603/0013-8746(2006)99[656:FROMDC]2.0.CO;2</div>\n</div>\n",
"supporting": [],
"filters": [
"rmarkdown/pagebreak.lua"
],
"includes": {},
"engineDependencies": {},
"preserve": {},
"postProcess": true
}
}
4 changes: 3 additions & 1 deletion _freeze/software/execute-results/html.json
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,9 @@
"result": {
"engine": "knitr",
"markdown": "---\ntitle: \"Software, Data, and Research Compendia\"\nformat:\n html:\n from: markdown+autolink_bare_uris\n---\n\n```{=html}\n<!--\nBecause the rendered site is frozen, an update to the source code (i.e. this document) is required to update the page. After adding a publication to Zotero and syncing, edit this comment (add a space or something), `quarto_render()`, then push to GitHub to update the website. ||||||||\n-->\n```\n\n<div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, Orians, C. M., Schweiger, R., Dukes, J. S., &amp; M&#xFC;ller, C. (2024). <i>Code for&#xA0; &#x201C;Combined impacts of prolonged drought and warming on plant size and foliar chemistry&#x201D;</i> (v1.0.0). Zenodo. https://doi.org/10.5281/zenodo.11217919</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Riemer, K., <b>Scott, E. R.</b>, &amp; Meredith, L. K. (2023). <i>volcalc: Calculate Volatility of Chemical Compounds</i> (v2.1.1). Zenodo. https://doi.org/10.5281/zenodo.10392821</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Weiss, J., &amp; <b>Scott, E. R.</b> (2023). <i>azmetr: Access Arizona weather data from the AZMet API</i> (v0.2.1). Zenodo. https://doi.org/10.5281/zenodo.10044639</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\">Ewinghill, T., <b>Scott, E. R.</b>, &amp; Guo, J. (2023). <i>Code for &#x201C;University of Arizona Cooperative Extension Needs Assessment 2022 Dashboard.&#x201D;</i> Zenodo. https://doi.org/10.5281/zenodo.7931082</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, Jackson, E. D., Casolaro, C., Nebeker, R. S., Dukes, J. S., Griffin, T., &amp; Orians, C. M. (2023). <i>Code and data from: Current and legacy effects of precipitation treatments on growth and nutrition in contrasting crops</i> (v1.0). Zenodo. https://doi.org/10.5281/zenodo.7817780</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, &amp; Bruna, E. M. (2022). <i>bdffpRain: Rain gauge data from the Biological Dynamics of Forest Fragments project</i> (v0.0.1). Zenodo. https://doi.org/10.5281/zenodo.6557721</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b> (2022). <i>BrunaLab/bdffp-cmip6: Downloading and wrangling CMIP6 model output for the Biological Dynamics of Forest Fragments Project region</i> (v1.0.1). Zenodo. https://doi.org/10.5281/zenodo.6558264</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b>, &amp; Bruna, E. M. (2021). <i>BrunaLab/HeliconiaDemography: Data and Code for: Scott ER, Uriarte M, Bruna EM (2021) Delayed effects of climate on vital rates lead to demographic divergence in Amazonian forest fragments. Global Change Biology.</i> (v1.0). Zenodo. https://doi.org/10.5281/zenodo.5608621</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b> (2021). <i>bumbl: Tools for modeling bumblebee colony growth and decline</i> (v1.0.1). https://doi.org/10.5281/ZENODO.4545782</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b> (2021). <i>Aariq/leafhopper-observational: Research compendium for &#x201C;Differing non-linear, lagged effects of temperature and precipitation on an insect herbivore and its host plant&#x201D;</i> (v2.0.0). Zenodo. https://doi.org/10.5281/zenodo.4557659</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b> (2021). <i>Aariq/PCA-vs-PLS: Research compendium for &#x201C;Using the right tool for the job: the difference between unsupervised and supervised analyses of multivariate ecological data&#x201D;</i> (v2.0.0). Zenodo. https://doi.org/10.5281/zenodo.4557672</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b> (2020). <i>Data and analysis for: Changes in tea plant secondary metabolite profiles as a function of leafhopper density and damage</i> (v1.1.2). Zenodo. https://doi.org/10.5281/zenodo.3706927</div>\n</div> <div class=\"csl-bib-body\" style=\"line-height: 2; padding-left: 1em; text-indent:-1em;\">\n <div class=\"csl-entry\"><b>Scott, E. R.</b> (2019). <i>holodeck: A Tidy Interface for Simulating Multivariate Data</i>. https://doi.org/10.5281/zenodo.2641200</div>\n</div>\n",
"supporting": [],
"supporting": [
"software_files"
],
"filters": [
"rmarkdown/pagebreak.lua"
],
Expand Down

0 comments on commit 5c0548f

Please sign in to comment.