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Cenik Lab

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  1. satmut_utils satmut_utils Public

    Forked from ijhoskins/satmut_utils

    Simulation and variant calling in paired-end, targeted RNA-seq saturation mutagenesis data.

    Python 2

  2. CenikLab.github.io CenikLab.github.io Public

    HTML 1 2

  3. TACC-Examples TACC-Examples Public

    1 1

  4. ribo-itp_paper ribo-itp_paper Public

    Scripts and references used for the Ribo-ITP paper

    Jupyter Notebook 1

  5. ribo-itp_paper_references ribo-itp_paper_references Public

    Reference files of the human and mouse transcriptomes for the Ribo-ITP paper

    Jupyter Notebook 1

  6. sars-cov2_NSP1_protein sars-cov2_NSP1_protein Public

    Supplementary files of our sars-cov2 NSP1 protein manuscript

    Jupyter Notebook 1

Repositories

Showing 10 of 12 repositories
  • CenikLab.github.io Public
    CenikLab/CenikLab.github.io’s past year of commit activity
    HTML 1 MIT 2 0 4 Updated Nov 18, 2024
  • TE_model Public
    CenikLab/TE_model’s past year of commit activity
    Python 0 0 1 0 Updated Oct 26, 2024
  • consistency_Ribo-seq Public
    CenikLab/consistency_Ribo-seq’s past year of commit activity
    Python 0 0 0 0 Updated Jan 30, 2024
  • satmut_utils Public Forked from ijhoskins/satmut_utils

    Simulation and variant calling in paired-end, targeted RNA-seq saturation mutagenesis data.

    CenikLab/satmut_utils’s past year of commit activity
    Python 2 GPL-3.0 1 1 0 Updated Dec 25, 2023
  • non_readable_ranges Public

    A collection of scripts to find duplicate and therefore non-readable ranges in a transcriptome

    CenikLab/non_readable_ranges’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 23, 2023
  • ribo-itp_paper Public

    Scripts and references used for the Ribo-ITP paper

    CenikLab/ribo-itp_paper’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jun 29, 2023
  • satmut_utils_supplementary Public Forked from ijhoskins/satmut_utils_supplementary

    Supplementary files for satmut_utils secondary analysis

    CenikLab/satmut_utils_supplementary’s past year of commit activity
    0 1 0 0 Updated Dec 5, 2022
  • satmut_utils_refs Public Forked from ijhoskins/satmut_utils_refs

    Curated references files for use with satmut_utils

    CenikLab/satmut_utils_refs’s past year of commit activity
    0 1 0 0 Updated Apr 7, 2022
  • plot_examples Public

    Examples of plots for publications

    CenikLab/plot_examples’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 19, 2021
  • ribo-itp_paper_references Public

    Reference files of the human and mouse transcriptomes for the Ribo-ITP paper

    CenikLab/ribo-itp_paper_references’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Oct 21, 2021
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